Module 2 Pharmacognosy New
Module 2 Pharmacognosy New
Module 2 Pharmacognosy New
Pharmacognosy
BRIEF HISTORY
Babylonians – made clay models of man
Egyptians – very apt in the practice of
embalming Greeks
Pedanios Dioscorides – De materia medica libre cinque (five volumes), 600 plants
(Rome) Galen – described the method of preparing formulas containing plant and animal drugs and the term
”Galenical pharmacy” originated (Cold cream – Galen’s cerate)
Germans
C.A. Seydler – coined the term pharmacognosy in his dissertation in 1815 (title: Anaclectica pharmacognosthica)
Fluckiger –most comprehensive definition of pharmacognosy : “simultaneous application of various
scientific disciplines with the object of acquiring knowledge of drugs from every point of view”
J.A. Schmidt – Lerbuch der Materia medica
Pharmacognosy – “an applied science that deals with the biologic, biochemical and economic features of natural drugs and
their constituents that originate in the plant and animal kingdom”
EVALUATION OF DRUGS (determine the quality (intrinsic property) and purity (absence of adulterants) of drugs)
1. Organoleptic - by means of the organs of sense; macroscopic appearance
2. Microscopic - essential in the study of adulterant in powdered plants (identity and purity)
3. Biologic - pharmacologic activity of certain drugs has been applied to their evaluation or standardization
4. Chemical - assay of AC using chemicals (titration); best method of determining official potency
5. Physical - physical constants (solubility, spec grav, optical rotation, congealing point, refractive index, MP)
CLASSIFICATION OF DRUGS
Morphology – forms
Taxonomy – phylogeny (natural relationship or among plants and animals)
Pharmacologic or Therapeutic – based on effect on the body
Chemical classification – based on active constituents; Preferred Method of Classification
Drug biosynthesis/Biogenesis – study of the biochemical pathways leading to formation of secondary constituents (drugs)
Carbohydrates Glycosides
BIOGENESIS
Proteins OR
Tannins DRUG
BIOSYNTHESIS
Fats Volatile oils or
Fixed oils
MONOSACCHARIDES
Cannot be hydrolyzed to simple sugar substances that is ketonic or aldehydic substitution product of a polydroxy alcohol
PENTOSES
Xylose (D-xylose, Wood Sugar)
obtained by boiling corn cobs, straw or similar materials with dilute acid to hydrolyze the xylan polymer
diagnostic aid in intestinal malabsorption
OLIGOSACCHARIDES
DISACCHARI
DES
Other N Origin Uses
Sucrose Saccharu Saccharum officinarum (cane) Demulcent, Sweetening, Coating, Preservative,
Glu + Fru m Cane Beta vulgaris (beets) Production of syrups, Retards oxidation
(non-reducing) sugar Beet Acer saccharum (maple)
sugar
Table sugar
Maltose Malt sugar From germination of barley
Glu + Glu
Lactose Milk sugar Cow’s milk (Bos Taurus) Isolation of Lactose
Glu + Butter – cream, united fat globules
Gal Lactulose (Alkaline lactose)
Buttermilk – liquid separating from butter
lactic & acetic acid
(reducing) Skimmed milk – left after cream separates
(irritation, catharsis)
Dec serum NH3 in encephalopathy
Cheese – coagulum, skimmed m. +
rennin
Whey – liquid separated from coagulum
POLYSACCHARIDES
Polysaccharides are polymers of monosaccharides (sugar) linked together through glycosidic(ether) linkages
Temporary storage form of photosynthetic products
systematic nomenclature are given the ending “an”, glycan is another word
Amylos Amylopectin
e
Linear Branched
250-300 glucose units 1000 or more glucose units
25% 75-80%
α-1,4 glucosidic bonds α -1,4 and α-1,6 (every 25 glucose)
Soluble Insoluble (paste forming)
Blue Blue-violet or purple
HOMOGLYCANS
Use
Starch (Glucosan) Tablet filler, binder, and Enzymes that break down starches:
Zea mays (corn) disintegrant Antidote for iodine β amylase – pancreatic juice and saliva
Triticum aestivum (wheat) poisoning α amylase – hydrolyzes it to maltose
Solanum tuberosum (potato) Permanent reserve food material in plants
Starch
Maltose
2 glucose
Inulin (Fructosan) Ingredient in culture media
Used in evaluation of renal function
Dextran (Glucosan) dextran sucrase (from Leuconostoc mesenteroides)
- plasma expander Sucrose Dextran
Cellulose Purified/Absorbent Cotton – from the hair of the seeds of Gossypium hirsutum
Use: mechanical protection against bacteria; absorb mucus, pus, and blood
Other derivatives:
Cellulose Acetate Pthalate (CAP) – film coating, Methyl/Ethylcellulose
HETEROGLYCANS (yield more than one type of monosaccharide units upon
hydrolysis) Gums and Mucilages
Natural plant hydrocolloids that may be classified as anionic or non-ionic polysaccharides
Produced by plants as a protective after injury
Upon hydrolysis, they yield arabinose, galactose, glucose, mannose, xylose, and other uronic acid derivatives
USES: suspending agents, dental adhesives, laxatives
PLANT
EXUDATES
Tragacanth Astragalus gummifer Bassorin (swells) Suspending agent,
Best Tragacanthin (thickener) Emulsifier,
mucilage Adhesive,
(resistant to Demulcent,
acid hydrolysis) Emollient
5-6% dispersion in H2O
Acacia Gum arabic Acacia senegal Arabin Incompatible with OH
35-36% dispersion
Ghatti Indian Gum Anogeissus latifolia Acacia substitute
Karaya Sterculia Gum Sterculia urens D-galacturonic acid Laxative, Suspending
(fetid odor) D-glucoronic acid agent, Adhesive
MARINE
GUMS
Agar Japanese Gelidium cartilagineum Agarose Laxative, tablet
Insinglas/Gelatin (Red algae) Agaropectin diluents/disintegrant
Algin Macrocystis pyrifera Sodium alginate Suspending agent, tablet
(brown seaweed) binder, thickener
Carageenan Irish Chondrus crispus Kappa- & Iota- Demulcent, bulk laxative
Moss, Gigartina carageenan
Chrondus mamillosa (swelling) Lambda-
carageenan
(nonswelling)
Danish agar Furcerallan Furcellaria fastigiata k-carrageenan Suspending agent
SEED GUMS
Plantago Psyllium, Plantago psyllium (Spanish) Bulk laxative
Plantain Seed P. ovate (Blonde/Indian)
Cydonium Quince seed Cydonia vulgaris
Guar Gum Guaran Cymopsis tetragonolobus 1,4 linked D- Laxative, thickener, binder
mannopyranosyl
Locust Bean Carob pulp Ceratonia siliqua Chocolate substitute
Gum St. John’s bread
MICROBIAL
GUM
Xanthan Xanthomonas campestris Peudoplastic activity
Gum which enables toothpaste
and ointment both to hold
shape and spread readily
PECTIN – purified carbohydrate product obtained from the dilute acid extract of inner portion of the rind of citrus fruits or
from apple pomace
Active Constituent : linear 1,4 linked D-galacturonan
Uses : protectant, s.a., ingredient in many antidiarrheal formulations
[O] PLANT ACIDS
a. Cherry Juice or Succus cerasi
Ripe fruit of Prunus cerasus
Contains pectin (incompatible with OH)
Constituent: Malic acid (present in cherry, apple, pear)
Use: preparation of cherry syrup
b. Plant Acids
Uses: Acidulants in effervescent formulations, Component of buffer systems
a. Citric acid - (2-hydroxy 1,2,3, propane trioic acid) isolated by Scheele from lemon juice in 1784
b. Lactic acid - (alpha-hydroxy propionic acid) acidulant in infant feeding formula
c. Tartaric acid - (1,2,3, dihydroxy butane dioic acid) by product of wine industry
d. Fe fumarate - hematinic
c. Alcohol or Ethanol
95% ethanol by volume @15.56°C
Product of fermentation
Undergo the process of distillation to concentrate the alcohol content to 40-55%
brandy - distilled wine
whiskey- malted
grain rum - molasses
wine - mild stimulant and tonic
Sorbitol (D-glucitol)
From the ripe berries of mountain ash, Sorbus aucuparia
half as sweet as sucrose
has humectant properties (ingredient in toothpaste, chewing gums and various dietetic products)
not absorbed on oral ingestion that is why it is used in the manufacture of chewing gums
ANTHRAQUINONE GLYCOSIDES
Cathartics (except
chrysarobin) Aglycone:
Anthracene
ID test: Borntrager’s test
Amygdalin
Amygdalase *Amygdalase + Prunase =
EMULSIN Mandelonitrile glucose
Prunase
Mandelonitrile +
Glucose Benzaldehyde +
HCN
PHENOL Uva Ursi (Bearberry) Arctotaphylos uva- Arbutin – antiseptic and astringent
ursi
LACTONE GLYCOSIDES
Origin Use
Coumarin Dicumarol, Dipteryx odorata Anticoagulant
Bishydroxycoumarin (tonka beans)
Hydrolyzabl Nonhydrolyzable/Condensed/Proanthocyan
e idin
(from condensation of catechin and
leucocyanidin)
Heating Gallic acid Pyrogallol Catechol
5. Phospholipids (Phosphatides) – Ester consisting of glycerol in combination with fatty acids, phosphoric acid
and nitrogenous compounds (Lecithin)
6. Glycolipids (Cerebrosides) – Substances isolated from the brain and various sources which on hydrolysis yield
fatty acids, galactose and nitrogenous compounds (Phrenosin and kerasin)
3. Iodine number
# of grams of iodine absorbed by 100g of the substance
indicates the degree of unsaturation of the fatty acids
Coconut Oil Cocos nucifera Lauric & Myristic acid Solvent for IM injection
Palm Oil Elaeis guincenss Shortening, frying, soap & candle manu
Safflower Oil Carthamus tinctoria Linoleic acid Dietary supp (False claim: ↓ cholesterol)
Sunflower Oil Helianthus annus Alternative to corn oil and safflower oil
Prostaglandins – class of natural products with potent and diverse biological activities
Lipid metabolites formed in the body from essential, unsaturated fatty acids from the diet.
Linoleic – most important dietary precursor of the prostaglandins
– converted by elongation and desaturation in the liver to arachidonic acid
2 classes:
Terpene derivatives - via acetate-mevalonic acid pathway
Aromatic compounds - via schikimic acid-phenylpropanoid route
Fixed Volatile
Oil Oil
Ester of Glycerol + Fatty Acid Made up of terpenes
Can be saponified Cannot be saponified
Permanent spot on brown paper No permanent spot on brown paper
Cannot be isolated by distillation Can be distilled from natural source
Become rancid Resinify on long standing
3. Expression
a. Ecuelle - rolling the fruit over a trough lined with sharp projections (citrus oils)
b. Enfleurage - expression with the use of cold fat (perfume)
Definition Examples
Top Notes Most volatile products Lemon oil, Lavender oil, Anise oil
Leave the skin readily
Middle Notes Intermediate tenacity Thyme oil, Neroli oil, Rose oil
and volatility
Base Notes Low volatility and Musk
aka Fixatives high tenacity Dried secretion from the preputial follicles
of the male musk deer of Asia (Moschus
spp)
Civet
A glandular secretion appearing in an
outwardly discharging pockets of Civet cats
(Paradoxurus hermaphroditus)
Ambergris
Most valuable material
Pathologic product formed in the stomach of
spermwhale when it feeds on squid or cattlefish
Phenylpropanoids
– contain C6 phenyl ring with an attached C3 propane side chain
– those in volatile oils are phenol or phenol ethers
ALCOHOL
Peppermint Oil Mentha piperita Menthol
Japanese Peppermint Mentha arvensis High menthol concentration than M. piperita but it has an
Oil inferior flavor
Cardamom Oil Elettaria cardamomum Flavor, carminative
Coriander Oil Coriandum sativum Flavor, carminative
Rose Oil Rosa gallica, R. damascena, Perfume
Otto of Rose R. alba, R. centifolia
Orange Flower Oil Citrus aurantium Perfume, flavor
Neroli Oil
Juniper Oil Juniperus communis Flavor, diuretic in the OTC drug, Odrinil®
ALDEHYDE
Cinnamon Oil Cinnamomum loureirii Flavoring, carminative, pungent aromatic. Antiseptic
Cassia Oil
Cinnamaldehyde
Natural: cassia oil
Synthetic: benzaldehyde + acetaldehyde (action of NaOH)
Lemon Peel Citrus limon Limonene & Citral (neral & geranial)
Cymbopogon
Citronella Oil Perfume, insect repellant
winterianus, C. nardus
Synthetic: racemic
Natural: dextrorotatory
Spearmint Mentha spicata (+)Carvone has the same Flavor, carminative
odor as that of caraway Gums, toothpaste, mouthwash
Caraway Oil Carum carvi (+)Carvone Flavor, carminative
Barosma betulina, Diuretic in OTC drugs for
Buchu B. Crenulata *Diosphenol menstrual problems,
B. Serratifolia Fluidex,
Odrinil
Wormwood Oil
Artemisia absinthium Thujone Counterirritant in Absorbine Jr.
Absinthe Oil
Cedar Leaf Oil Thuja accidantalis Thujone, Fenchone Counterirritant in Vicks Vaporub
SESQUITERPENES
1. Chamomile Matricaria chamomila Carminative, spasmolytic
2. Artemisinin Artemisia annua Antimalarial
Quinghaosu
3. Valerian Valeriana officinalis Sedative and anxiolytic
4. Feverfew Tanasetum parthenium Antipyretic, migraine tx
DITERPENES
1. Taxol Taxus brevifolia Antineoplastic
2. Ginkgo Ginkgo biloba Increases blood fluidity
TRITERPENES
Quassinoids – pediculocide
1. Neem Tree Azadirachta indica Antifeedant properties (mosquito repellant)
RESIN AND RESIN COMBINATIONS
Amorphous products with complex chemical nature
Hard transparent or translucent and when heated they soften and melt
Resin Combinations:
1. Oleoresins – resins + volatile oils
2. Oleo-gum-resins – resins + volatile oils + gum
3. Balsams – contain cinnamic acid, benzoic acid, or both
4. Glucoresins or glycoresins – glycosidal combinations (ex. jalap and podophyllum)
Resin Acids (abietic acid, copaivic & oxycopaivic acid, commiphoric acid)
RESINS• contain large proportion of oxyacids, usually combining the properties of carboxylic acids and phenols
• resinates – metallic salts of resin acids (some
Other Name are used in soaps
Origin and varnishes)
Constituent Use
Rosin
Resin AlcoholsColophony Pinus Palustris
(benzoresinol, storesinol) Stiffening agent
• do not give a tannin reaction with iron salts
Podophyllum peltatum
• occur in Mayapple
free state and as esters in combination with simple aromatic acids Drastic purgative
Podophyllum Indian Podophyllum Podophyllin
Mandrake Antimitotic
– rhizome of P.siaresinotannol and sumaresinotannol,
Resinotannols (aloeresinotannol, peruresinotannol, and toluresinotannol)
(papilomas)
• gives a tannin reaction with ironemodi
salts
Eriodictyon Disguise Quinine bitterness
Eriodictyon Yerba santa
Resenes – B-complex natural substances californicu Stimulating expectorant
devoid of characteristic chemical properties
m (1g)
Glycoresins – yields sugars and complex resin acids on hydrolysis
Jalap Jalap root Exogonium purga Jalap resin Hydragogue cathartic
Pharmaceutic Resins are usually obtained by:
Mastic - extracting
Mastiche, Mastich& precipitating
with alcohol Pistacia lentiscus Dental varnish to seal cavities
the resins in water (jalap & podophyllum)
- separating the oil from oleoresin by distillation (copaivic resin)
Centrally acting muscle
Kava Kava-kava
- collecting the natural product Piper methysticum
throught natural or artificial punctures (mastic)
relaxant Antipyretic, local
anaesthetic
Indian hemp THC – euphoric agent
Cannabis Cannabis sativa Hashish
Marihuana, Pot Cannabidiol – manuf of
rope
OLEORESINS
Other Name Origin Constituent Use
Gum turpentine
Turpentine Pinus palustris Counterirritant
Gum thus
Irritant, carminative,
Capsicum Cayenne pepper Capsicum frutescens Capsaicin
Rubefacient, Stimulant,
Condiment
Flavor, condiment,
Ginger Zingiber Zingiber officinale
stimulant, carminative,
ginger ale
White Pine Pinus srobus Coniferin Expectorant
Genitourinary disinfectant,
Copaiba Balsam of Copaiba Copaifera spp.
Diuretic, Expectorant,
Laxative
OLEO-GUM-RESINS
1. Myrrh/Gum myrrh Commiphora molmol Astringent, Embalming
2. Asafetida/Devil’s Dung
BALSAMS
Origin Use
Storax Liquidambar orientalis Pharmaceutic aid for compound benzoin tincture
Liquid Storax Stimulant, Expectorant, Antiseptic
Styrax
Peru Balsam Myroxylon pereirae Local protectant and rubefacient, Antiseptic
Tolu Balsam Myroxylon balsamum Pharmaceutic aid in compound benzoin tincture
occurs as plastic solid Expectorant, Flavoring in syrups, confectionery, chewing
that gradually gum, perfumery
hardens
Benzoin Styrax benzoin Antiseptic
Compound Benzoin Tincture (benzoin, aloe, storax, tolu)
Benzoic acid (synthetic product; first obtained by
sublimation from Sumatra benzoin; antifungal)
ALKALOIDS
Bitter, basic nitrogenous compounds, sparingly soluble in water
Most of them end in –ine
All are solids except:
o Coniine
o Nicotine
o Sparteine
Form double salts with compounds of mercury, gold, platinum, and other heavy metals
Alkaloidal reagents/precipitants:
1. Mayer’s Mercuric potassium iodide White or slightly yellow ppt.
2. Marmers Potassium-cadmium iodide White ppt.
3. Dragendorff’s Potassium-bismuth iodide Orange
4. Wagner’s Iodine TS Reddish brown or red brown ppt.
5. Scheibler’s Phosphotungstic acid
6. AuCl
7. Valser’s KI and mercuric White ppt.
8. Tannic acid
9. Hager’s iodide Yellow
10. Sonnenscheins
Picric acid
Phosphomolybdic
acid
CHARACTERISTICS OF ALKALOIDS
1. Free alkaloids - sparingly soluble in H2O
2. + acids --> salts
3. + salts of heavy metals --> highly insoluble precipitates
4. nitrogenous, physiologically active
5. alkaloidal salt + Na2CO3 --> free base
6. Solid alkaloid - white, soluble or slightly soluble in H2O, soluble in organic solvents
7. Pure alkaloids - insoluble in water, soluble in organic solvents
8. alkaloids + acids = alkaloidal salts (soluble in water)
TROPANE/SOLANACEOUS
Origin Use
Atropa belladonna Parasympathetic depressant
Belladonna Deadly nightshade
Atropos – fate that cuts the thread of life Adjunct in tx of peptic ulcer
1. Atropine
o Antispasmodic
o Antisialogogue – decrease production of secretion
o Mydriatic and cycloplegic
o Antidote for cholinesterase inhibitors
2. Scopolamine or Hyoscine
o Hyoscyamus niger
o Treatment of motion sickness
o Trans-scoop or transderm Scop – 4 hours before anti-emetic effect
QUINOLINE
Cuprea
o Remijia purdieana
Astringents in inflammation
Hydrastis Golden seal Hydrastis canadensis Hydrastine
of the mucous membrane
Alkaloids of Opium
1. morphine most abundant, most important
2. codeine heroin Papaverine
methyl morphine most widely used; antitussive
3. Hydromorphine diacetylmorphine
Hydrocodone Apomorphine
hallucinogen
4. relief of ischemia & arrhythmias
5.
6.
7. emetic
8. Narcotine/Noscapine ANARCOTINE, antitussive
9. Paregoric camphorated opium tincture
10. Dover’s powder Ipecac + opium
IMIDAZOLE
Pilocarpine (Pilocarpus, Jaborandi)
BO : Pilocarpus jaborandi
Use : Cholinergic drug used in the Tx of glaucoma; miotic
STEROIDAL
Veratum Viride (American or Green hellebore)
BO : Veratrum viride
Uses : hypotension, cardiac depressant, Black hellebore – cardiac stimulant
ALKALOIDAL AMINES
Constituent Use
Ephedrine Ephedra, Mahuang Ephedra sinica Sympathomimetic
Khat Abyssinian tea Catha edulsis Cathinone - alleviate sensation of hunger and fatigue
Mescaline (3,4,5 trimethoxy-ẞ-phenylethylamine)
Peyote Mescal buttons Lophophora williamsii
Hallucinogen and euphoric
PURINE OR METHYLXANTHINES
1. Caffeine 1,3,7 trimethylxanthine
o Does not react with or ppt with alkaloidal reagnents
o Kola (dried cotyledon of Cola nitida) Caffeine is detected by
o Cofee bean (dried seeds of Coffea arabica) means of a Murexide test
o Guarana (Paullinia cupana) purple color
o Mate/Paraguay tea (Ilex paraguariensis)
VIRAL VACCINES • cultures: chick embryo, monkey kidney, or human diploid cells
Description Grown on
Smallpox Vaccine (Dr. Edward Jenner) Living virus of vaccinia (cowpox) Skin of a vaccinated bovine calf
Rabies Vaccine Sterile lyophilized preparation of: Human diploid embryo lung tissue
Human Diploid Cell Rabies Vaccine Whole virion (Wistar (whole virion)
(HDCV) rabies virus) Human diploid cell cultures
(Imovax , WYVAC )
® ®
Subvirion rabies virus (subvirion)
Pasteur was able to “fix” (Pasteur- derived Pitman- *Brain tissue – formerly used
rabies virus Moore virus) for preparing the vaccine;
myelin
(“paralytic factor”)
Yellow Fever Vaccine Attenuated strain of living yellow Living embryo of domestic fowl
(YF-VAX ) ®
fever virus (Vector: Aedes mosq) (Gallus domesticus)
Influenza Virus Sterile, aqueous solution of Extra-embryonic fluid of
Vaccine (Fluzone®, suitably inactivated influenza influenza virus-infected chick
Fluogen®) virus types A and B embryo
high strain specificity and
genetic instability (reevaluated
regularly)
Poliovirus Vaccine Inactivated Sterile suspension of inactivated Rhesus monkey kidney tissues
IPV, Salk poliomyelitis virus types 1, 2 and
3
Type 1 (Brunhilde) poliovirus – responsible for major Landsteiner and Popper – first
epidemics Type 2 (Lansing) poliovirus – sporadic transmitted poliovirus
Type 3 (Leon) poliovirus – less frequent epidemics John F. Enders – originated a method of
cultivating poliovirus
Improved strains: Jonas Salk – perfected the roller-tissue
Type 1 Mahoney strain method, as well as the detoxified form of
Type 2 MEF-1 strain vaccine
Type 3 Saukett strain
BACTERIAL VACCINES
suspensions of attenuated, more commonly, killed pathogenic bacteria in isotonic NaCl soln
“S”/smooth strains are more antigenic than “R”/rough strains
Fluid Toxoids
- formaldehyde (reduces or eliminates toxic properties w/o affecting antigenicity)
- induces artificial active immunity
Adsorbed Toxoid
- precipitated or adsorbed with alum, aluminum hydroxide, or aluminum phosphate
- slower release of antigen, subsequent production of higher & more prolonged Ab titers
- more prone to produce local reactions at the injection site
Use
Diphtheria Antitoxin Passive immunity, curative
Tetanus Antitoxin Treatment & prophylaxis of tetanus if Tetanus Ig is not available (passive immunity)
Botulism Antitoxin (multivalent) treat all cases of toxemia caused by types of botulinus bacteria used
type A, B, E strains
VENOMS AND ANTIVENINS (From blood of venom-immunized animals, usually horses)
o Venoms – poisonous excretions produced by animals; equivalent to exotoxins in bacteria
o Snake venins or venoms – obtained by holding a poisonous snake over a conical glass container
covered with a sheet of thin rubber
Iodinated 125I albumin injection and diagnostic aid to determine blood volume and cardiac output
Iodinated 131I albumin injection
Iodinated 131I aggregated injection diagnostic aid for determination of pulmonary clearance
HERBS AND “HEALTH” FOODS
🟃 Natural – identifies only a source, not necessarily degree of superiority or inferiority
🟃 Organic – the produce was grown under conditions utilizing only natural fertilizers, no pesticides
1. CELL MEMBRANE
CELL WALL
1. Phospholipds
2. Glycoproteins and Glycolipids Plants Cellulose
3. Cholesterol Bacteria
4. Arachidonic Acid Peptidoglycan Fungi
Chitin
2. ORGANELLES
1. Mitochondrion - powerhouse of the cell; produces ATP (energy)
Pentoses Epimers
1. Arabinose - found in Gum Arabic/Acacia (isomers that differ in only 1
2. Ribose - found in RNA C)
3. Deoxyribose - found in DNA
Epimers of
Glucose: C2 –
DISACCHARIDES mannose
1. Sucrose - Glu + Fru
2. Maltose - Glu + Glu (α-1,4)
3. Cellybiose - Glu + Glu (β-1,4)
4. Lactose - Glu + Gal
OLIGOSACCHARIDES
1. Dextrin - product of starch degradation
POLYSACCHARIDES/GLYCANS
Homopolysaccharides Heteropolysaccharides
Starch α-1,4 / α-1,6 Hyaluronic acid
Glycoge α-1,4 and α-1,6 Dermatan (skin)
n β-1,4 Keratan (nails)
Cellulos NAG Agarose (seeweeds)
e Chitin Peptidoglycan (bacterial cell wall)
Schweitzer’s Reagent: only reagent that can dissolve cellulose
CARBOHYDR METABOLISM
ATE The sum total of all chemical reactions needed to maintain life
Fates of Glucose
1. ATP production
2. Amino acid and triglyceride synthesis
3. Glycogen synthesis
OXIDATIVE PHOSPHORYLATION
⚫ Entails the formation of 2 or 3 units of ATP per unit of metabolite transformed
⚫ Uses co-enzymes: FAD and NAD
⚫ Substrate + NAD+ Substrate + NADH
Glycolysis/Embden-Meyerhof Pathway
o Aerobic (mitochondria)
o Anaerobic (cytoplasm)
o End product: 2 pyruvic acid
Summary: 1 Glu 2 pyruvic
acid
6-8 ATP
3. Gluconeogenesis
o Glucose is synthesized from noncarbohydrate materials (lactate, glycerol, amino acids), proteins, fats,
and other sources
Pentose phosphate pathway/Phosphogluconate pathway/Hexose monophosphate shunt
o Occurs in the CYTOSOL
o To produce ribose – 5 – PO4 for nucleotide/DNA synthesis
o To produce NADPH from NADP+ for FA and steroid synthesis, maintaining reduced Glutathione inside RBCs
o To interconvert pentoses and hexoses
o ENZYME: Glucose – 6 – PO4 Dehydrogenase
o G6PD Deficiency stops PPP
o production of NADPH failure to maintain glutathione in the reduced state (maintains RBC integrity)
o results to hemolytic anemia upon taking oxidizing drugs (e.g. primaquine, sulfonamides, INH)
GROUPS OF LIPIDS
1. LIPOPROTEINS – carrying lipids in the body
Chylomicrons
VLDL
HDL/Good cholesterol - Carries cholesterol from vessels to liver where it is metabolized
LDL/Bad cholesterol - Deposits cholesterol to other parts of the body
2. TRIGLYCERIDES
Energy storage
Excess triglycerides are deposited in adipose tissues
Functions: Protection (visceral organs), Insulation, Source of energy (9 cal/g)
Components: Glycerol + Fatty acids
3. PHOSPHOLIPIDS/PHOSPHOGLYCERIDES
Membrane lipids
Glycerol + Fatty acid + Phosphoric acid + Organic molecule/Polar head group
Hydrogen : Phosphatidic acid (parent compound of all phosphoglycerides
Choline : Phosphatidylcholine (aka Lecithin) ID Test for choline: Rosenheim Test
Ethanolamine : Phosphatidylethanolamine (aka Cephalin)
Glycerol : Phosphatidylglycerol (aka Cardiolipin)
4. SPHINGOLIPIDS/GLYCOLIPIDS/GLYCOSPHINGOLIPDS
Component of cell membrane, Component of myelin sheath
Skeleton: Ceramide (Sphingosine + Fatty acid) + Phosphoric acid + Organic molecule/Polar head group
Monosacch : Cerebrosides – component of myelin sheath
Disacch : Globoside
Charged group : Gangliosides
Phosphocholine/Phosphoethanolamine: Sphingomyelin
D. Sex Hormones
Estrogen, Progesterone - woman’s secondary characteristics
Testosterone - man
E. Adrenocortical Hormones
Vasopressin – regulates hormone & electrolyte imbalance (deficiency Diabetes insipidus)
LIPID METABOLISM Waste products of β oxidation:
Lipase
Lipids Glycerol + Fatty Acids (LIPOLYSIS) Acetoacetic acid
β-hydroxybutyric acid
Acetyl CoA (β-oxidation Acetone
pathway) GLyceraldehyde-3-phosphate
* The three are Ketone Bodies (acidic) DKA – Diabetic
Manifestation: acetone breath
SATURATED FATTY ACIDS Rosenheim Test—used to detect the presence of choline Liebermann-Burchar
10CCapric Acrolein – glycerol
12CLauric
14CMyristic
16CPalmitic (most abundant FA) 18CStearic
20CArachidic
# of mg of KOH required to Acid valueNeutralize the free acids in 1g
UNSATURATED FATTY ACIDS Ester valueSaponify the esters on 1 g
18:1Oleic SV/Koettsdorfer Neutralize free fatty acids and saponify esters Hydroxyl value #
18:2Linoleic Measures degree of unsaturation
18:3Linolenic (dietary precursor of PGE) 18:4Arachidonic (precursor of PGE)
Drying >120 (linseed, fish)
Vitamin F (essential FAs): Oleic, Linoleic, Linolenic Semidrying 100-120 (cottonseed, sesame)
Nondrying <120 (olive, almond)
Most abundant biomolecule (70% of the body)
PROTEINS
C, H, O, N (S,P)
Amino Acids
Building blocks of proteins
Amphoteric; At physiologic pH (isoelectric point, pH 7.4), exists as zwitterions
Peptide bond – the bond that joins each amino acid
Uses of Amino Acids
Tryptophan 5-hydroxytryptamine (5-HT)/Serotonin
Glycin Heme (hemoglobin)
Tyrosine Catecholamine (Dopamine, NE, E)
Histidine Histamine
Proline (Pro, P) – only amino acid without an amino group; It has an imino group (Imino acid)
Glycine (Gly, G) – simplest amino acid (R group is Hydrogen); only amino acid that is not optically active
Phe-Gly-Try-Tyr-Val-Gly
N terminal –
Phenylalanine C
terminal - Glycine
CLASSIFICATION OF PROTEINS
A. According to Composition
CONJUGATED PROTEIN
PROSTHETHIC GROUP EXAMPLES
nonprotein substances +
AA
Phosphoproteins Phosphoric acid Casein (milk), Ovovitellin (egg yolk)
Nucleoproteins Nucleic acid Nuclein (cell nuclei)
Glycoproteins Carbohydrate group Mucins (Vitreous humor and saliva)
Chromoproteins Colred prostethic group Hemoglobin (blood), Flavoproteins
Lipoproteins Lipids Fatty acid, Sterol, Lecithin
Metalloproteins metals Enzymes (tyrosinase, arginase, XO)
PRIMARY DERIVED
CHARACTERISTICS EXAMPL
PROTEIN
ES
Denatured Proteins
Proteans Acted upon by H2O/enzymes/acid Fibrin, Myosan
Metaproteins Acted upon by acid or alkali Acid or alkali albuminates
Coagulated Proteins Acted upon by alcohol or heat Coagulated albumin, Cooked meat
SECONDARY DERIVED PROTEIN
CHARACTERISTICS
formed from progressive hydrolysis of protein
Proteoses Highest MW group
Peptones Intermediate MW
Peptides Lowest MW group
B. According to Conformation
a. FIBROUS
Polypeptide chain arranged in tightly parallel fibers and sheets
Make up the structural framework of the body
1. Collagen
2. Elastin
3. Keratin
b. GLOBULAR
Polypeptide chains are arranged in compact, spherical forms; insoluble in water
1. Antibodies
2. Hormones
3. Albumin
c. NUTRIENT OR STORAGE
PROTEINS 1.Ovalbumin
- egg
white 2.Casein - milk
d. HORMONES
Chemical messengers
1.Insulin
2.Growth hormone/Somatropin
e. PROTECTIVE PROTEINS
1. Immunoglobulins/Antibodies/Serum globulin
o IgA - secretions
o IgG - smallest
o IgD - no function yet
o IgE - allergy
o IgM - largest ; first Ig produced during infection
PROTEIN + NONPROTEIN
Apoenzyme Cofactor
Oxidation-reduction metabolism
Oxidoreductases Ex. Dehydrogenases, oxidases, peroxidases
Hydrolyze substrates
Hydrolases Proteolytic enzymes, amylases, esterases
Esterases
o Lipase – breaks down lipids into glycerol + fatty acids (Lipolysis) Uric acid – waste
o Urease – Urea (waste product of breakdown of proteins) ammonia product of breakdown
of PURINES
Proeolytic Enzymes
DNA vs RNA
DNA RNA
Sugar 2-deoxyribose Ribose
Double stranded Single stranded
Purine Bases Guanine, Adenine Guanine, Adenine
Pyrimidine Bases Cytosine, Thymine Cytosine, Uracil
Nucleoside vs Nucleotide
Nucleoside Nucleotide
Base Base (N)
(N) Sugar
Sugar Phosphate
Nucleosides Nucleotides
Adenine Adenosine cAMP * cGMP *
Guanine Guanidine
Cytosin Cytidine
e Uracil Uridine
Tymine Thymidine * secondary messengers
DNA
Double helix – Watson and Crick
Coiled strands containing the genetic code
Helicases unwind the DNA double helix.
Structural Organization Primase creates a temporary RNA primer.
A. Primary - unique sequence of nucleotide DNA polymerase at the replication fork
- base or nucleotide sequence synthesizes DNA in a 5’→ 3’ direction.
≡Leading strand (continuous)
B. Secondary - DNA double helix ≡Lagging strand (discontinuous)
- H bonds DNA polymerase then removes the RNA primer and fills
DNA ligase then joins DNA fragments of the lagging stra
Properties: Further modified by topoisomerase
1. Complementarity
Pur Pyr
A T 2 H bonds
C G 3 H bonds
2. Antiparallelism
The structure should be arranged in a 3’ 5’ fashion
C1 – base
C5 – phosphate
Information Transmission
Information stored in DNA is transferred to RNA and then expressed in the structure of
proteins Two steps in process: Transcription, Translation
Types of RNA
o mRNA - messenger; “template” for transcription
o tRNA - transfer; carrying amino acids to sites of protein synthesis
o rRNA - ribosomal RNA
Translation (Protein Synthesis)
Information in mRNA translated into primary sequence of a protein in 4 steps:
o Activation of tRNA
o Initiation - small ribosomal subunit attaches mRNA at the initiation codon site and the first tRNA attaches
o Elongation - Transfer RNA (tRNA) translates the mRNA into the amino acid sequence
o Termination - Elongation continues until a stop codon is encountered
Start codon: AUG (methionine)
Stop codons: UAA, UAG, UGA
MUTATION
A change in shape, structure, and nucleotide sequence
Point Mutation
Transitional Mutation
Transversional Mutation
Missense Mutation
- Codon containing the changed base codes for a different amino acids
- Causes disease
- Example: UCA (serine) CCA (proline)
Nonsense Mutation
- Codon containing the changed base may become a stop codon
- Example: UCA (serine) UAA (stop codon)
Frameshift Mutation
Insertion Mutation
Deletion Mutation
VITAMINS AND VITAMIN-CONTAINING DRUGS
Vitamin
s
o Organic substances, not synthesized within the body, that are essential in small amounts for the maintenance of
normal metabolic functions
o Do not furnish energy and are not utilized as building units for cellular structure
o Term was derived in 1911 – vital amine
o Used as special dietary supplements or as drugs
Vit. B2, B3, B5 – coenzymes
Vit. B12, B9 – biosynthetic transfer of 1-C units
Vit. C – biosynthesis of hydroxyproline
Vit. B1, B6 – metabolism of carbohydrates and amino acids
Biotin – metabolic carboxylation
Vit. D, E – influence membrane transport
Stomatitis
Chelitis
B2 Riboflavin Redox coenzyme, FAD
Glossitis
SE: yellow urine
Pellagra
Niacin/Nicotinic
Dementia
B3 acid/Niacinamide/ Redox coenzyme, NAD
Dermatitis
Nicotinamide
Diarrhea
Paresthesias of the
Pantothenic acid Acetyl CoA
B5 extremities or “burning
“chick antidermatitis factor” Secretion of hormones (cortisone)
foot” syndrome
Transamination, Decarboxylation (CHO, AA),
Pyridoxine
RBC metabolism Peripheral neuropathy
B6 RBC fragility
Pyridoxol – plants
Pyridoxine antagonists: chloramphenicol, Hypochromatic
Pyridoxal and pyridoxamine
cycloserine, hydralazine, isoniazid and microcytic anemia
– animals
oral contraceptives
B17 Laetrile
MULTIVITAMIN THERAPY
Inadequate vitamin intake can result not only from a poor diet but also from alcoholism, increased needs during
pregnancy and lactation, prolonged broad-spectrum antibiotic therapy and the course of parenteral nutrition.
Filipino/Tagalog Name English Name Scientific Name
Singkamas Mexican turnip Pachyrhizus erosus
Talong Eggplant Solanum melongena
Sigarilyas Winged beans Psophocarpus tetragonolobus
Mani Peanuts Arachis hypogaea
Sitaw String beans Phaseolus vulgaris
Bataw Hyacinth bean Lablab purpureus
Patani Lima beans Phaseolus lunatus
Kundol Winter melon Benincasa hispida
Patola Sponge/vegetable gourd Cucunis acutangulus
Upo Bottle gourd Lagenaria siceraria
Kalabasa Squash Cucurbita maxima
Labanos White radish Raphanus sativus
Mustasa Mustard Brassica integrifolia
Sibuyas Onion Allium cepa
Kamatis Tomato Solanum lycopersicum
Bawang Garlic Allium sativum
Luya Ginger Zingiber officinale
Linga Sesame Sesamum indicum
MONOSACCHARIDES
1 Dextrose (blood sugar, d-glucose, alpha-d (+) – glucopyranose)
2 Fructose (d-fructose, levulose. B-D (-) fructopyranose, fruit sugar)
3 Xylose (d-xylose, wood sugar)
DISACCHARIDES
4 Sucrose (saccharum, cane sugar, beet sugar, table sugar)
5 Maltose (malt sugar)
6 Lactose (cows milk, milk sugar)
POLYSACCHARIDES
HOMOGLYCANS
1 Starch
2 Dextran
3 Cellulose
HETEROGLYCANS
1 Tragacanth
2 Acacia (gum Arabic)
3 Ghatti Gum (Indian Gum)
4 Karaya Gum (Sterculia Gum)
5 Plantago Seed
6 Cydonium
7 Guar Gum
8 Locust Bean Gum
9 Agar (red Algae)
10 Sodium Alginate (brown Seaweeds)
11 Carrageenan (red Algae Or
Seaweeds) 12 Danish Agar (red Algae)
13 Xanthan Gum (microbial Gum)
14 Pectin
CARDIAC
1 Foxglove (Digitalis purpurea)
2 Grecian Foxglove (Digitalis lanata)
3 Convallaria (Lily-of-the-Valley)
4 Apocynum (black Indian hemp, dog bane or Canadian hemp)
5 Adonis (pheasant’s eye)
6 Cactus Grandiflorus (night blooming cereus)
7 Black Hellebore (Christmas rose)
8 Strophanthus
9 Squill (Squill bulb)
ANTHRAQUINONE
1 Cascara Sagrada (rhamnus purshiana)
2 Frangula (Frangula or buckthorn bark)
3 Aloe
4 Rhubarb (Rheum, or Chinese rhubarb)
5 Senna (Senna or senna leaves)
6 Chrysarobin
SAPONIN
1 Glycyrrhiza (licorice root)
2 Ginseng
3 Dioscorea (Mexican Yam)
GLUCOSINOLATES OR ISOTHIOCYANATES
1 Mustard (black mustard, sinapis nigra or brown mustard)
2 White Mustard (white mustard or sinapis alba)
LACTONE GLYCOSIDES
1 Coumarin (dicumarol or Bishydroxycoumarin)
2 Cantharides (Spanish flies, Russian flies, blistering flies)
3 Psoralens
ALCOHOL: Salicin
ALDEHYDE: Vanilla (vanilla or vanilla bean)
PHENOL: Uva Ursi
LIPIDS
FIXED OILS
SATURATED
1 Coconut Oil
2 Palm Oil
MONOUNSATURATED
1 Castor Oil
2 Olive Oil (sweet Oil)
3 Peanut Oil (arachis Oil)
4 Rapeseed Oil (canola Oil)
POLYUNSATURATED
1 Soybean Oil
2 Cottonseed Oil
3 Sesame Oil (teel Oil, Benne Oil)
4 Almond Oil (sweet And Bitter Almond)
5 Persic Oil (apricot Kernel Oil, Peach Kernel Oil)
6 Corn Oil
7 Safflower Oil (Safflower Seed Oil)
8 Sunflower Oil
9 Linseed Oil
10 Cod Liver Oil
FATTY ACIDS
1 Stearic Acid
2 Oleic Acid
3 Undecylenic Acid
4 Sodium Morrhuate
WAXES
1 Spermaceti
2 Jojoba Oil
3 Beeswax
4 Carnauba Wax
VOLATILE OILS
ALCOHOL
1 Peppermint Oil
2 Cardamom Oil
3 Coriander Oil
4 Rose Oil (otto Of Rose)
5 Orange Flower Oil (neroli Oil)
6 Juniper Oil
7 Pine Oil
ALDEHYDE
1 Cinnamon Oil (cassia Oil)
2 Lemon Peel
3 Orange Oil
4 Citronella Oil
5 Hamamelis Water
KETONE
1 Camphor
2 Spearmint
3 Spearmint Oil
4 Caraway Oil
5 Buchu
6 Wormwood Oil (absinthe Oil)
7 Cedar Leaf Oil
PHENOL
1 Thymol
2 Clove Oil
3 Myrcia Oil (bay Oil)
4 Creosote (beachwood Creosote)
5 Juniper Tar (cade Oil)
PHENOLIC ETHER
1 Nutmeg Oil (myristica Oil)
2 Fennel Oil
3 Anise Oil
ESTER
1 Gaultheria Oil (wintergreen Oil, Betula Oil, Sweet Birch Oil)
2 Lavender Oil
3 Pine Needle Oil (dwarf Pine Needle Oil)
4 Mustard Oil (allyl Isothiocyanate)
RESIN AND RESIN COMBINATIONS
RESINS
1 Rosin (colophony)
2 Podophyllum (mayapple, Mandrake)
3 Eriodictyon (yerba Santa)
4 Jalap (jalap Root)
5 Mastic (mastiche, Mastich)
6 Kava (kava-kava)
7 Cannabis (Indian Hemp, Marihuana)
OLEORESINS
1 Turpentine
2 Capsicum (cayenne Pepper)
3 Ginger
4 White Pine
5 Copaiba
OLEO-GUM-RESIN: Myrrh
BALSAMS
1 Storax (liquid Storax, Styrax)
2 Peruvian Balsam
3 Tolu Balsam
4 Benzoin
ALKALOIDS
PYRIDINE-PIPERIDINE
1 Areca (Areca Nut, Betel Nut)
2 Lobelia (Indian Tobacco)
3 Nicotine
TROPANE/SOLANACEOUS
1 Belladona (Deadly Nightshade Leaf)
2 Stramonium (Jimson Weed, Jamestown Weed)
3 Cocaine (Coca)
ISOQUINOLINE
1 Ipecac
2 Hydrastis (Golden Seal)
3 Sanguinaria (Blood Root)
4 Opium (opium Or Gum Opium)
INDOLE
1 Rauwolfia Serpentina
2 Catharanthus (Vinca)
3 Nux Vomica
4 Physostigma (Physostigma, Calabar Bean, Ordeal Bean)
5 Ergot (rye Ergot, Secale Cornutum)
STEROIDAL
1 Veratum Viride (American Or Green Hellebore)
2 White Hellebore (European Hellebore)
ALKALOIDAL AMINES
1 Ephedrine (Ephedra, Mahuang)
2 Colchicine (Colchium Seed)
3 Khat (abyssinian Tea)
4 Peyote (mescal Buttons)
PURINE BASES
1 Caffeine (1,3,7 Trimethylxanthine)
2 Theophylline (Thea , Tea , 1,3 Dimethylxanthine)
3 Theobromine (3,7 Dimethyl Xanthine)