High-Throughput Quantification of The Effect of DMSO On The Viability of Lung and Breast Cancer Cells Using An Easy-To-Use Spectrophotometric Trypan Blue-Based Assay
High-Throughput Quantification of The Effect of DMSO On The Viability of Lung and Breast Cancer Cells Using An Easy-To-Use Spectrophotometric Trypan Blue-Based Assay
High-Throughput Quantification of The Effect of DMSO On The Viability of Lung and Breast Cancer Cells Using An Easy-To-Use Spectrophotometric Trypan Blue-Based Assay
https://doi.org/10.1007/s00418-019-01775-7
ORIGINAL PAPER
Abstract
One of the main aspects investigated in potential therapeutic compounds is their effect on cells viability and proliferative abil-
ity. Although various methods have been developed to investigate these aspects, these methods present with shortcomings in
terms of either cost, availability, accuracy, precision, or throughput. This study describes a simple, economic, reproducible,
and high-throughput assay to quantify cell death and proliferation. In this assay, adherent cells are fixed, stained with trypan
blue, and measured for trypan blue internalization using a spectrophotometric absorbance plate reader. Corresponding cell
counts to the absorbance measurements are extrapolated from a standard curve. This assay was used to measure the effect
of dimethyl sulfoxide (DMSO) on the viability of breast and lung cancer cells. Decrease in cell count associated with the
increase in DMSO percentage and exposure time. The assay’s results closely correlated with the conventional trypan blue
exclusion assay (Pearson correlation coefficient (r) > 0.99; p < 0.0001), but with higher precision. The assay developed in
this study can be used for various applications such as optimization, cell treatment investigations, proliferation, and cyto-
toxicity studies.
Keywords Cell count · Trypan blue · Spectrophotometric assay · DMSO · High-throughput screening
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of these approaches requires special devices and reagents Table 1 Cell concentrations Con- Standard curve serial
that are relatively costly and often unavailable for use. Fur- seeded to constitute the standard cen- concentrations (cells/
curve tra- ml)
thermore, some of these methods focus on measuring cell
tion
number and size, but lack the ability to distinguish viable
num-
cells and cell aggregates. ber
Less demanding approaches with high accuracy and pre-
cision include the use of colorimetric assays (e.g., tetrazo- 1 350,000
lium salt-based approaches) (Mosmann 1983; Roehm et al. 2 262,500
1991). However, these methods require the use of reagents 3 196,875
and kits that are costly. Furthermore, as those approaches are 4 147,656
based on the measurement of the colored formazan products, 5 110,742
they are prone to artifacts affecting the NAD(P)H-dependent 6 83,056
cellular oxidoreductase enzymes’ activity and formazan pro- 7 62,292
duction (Maioli et al. 2009). These assays could as well be 8 46,719
cell-type dependent with varying efficiencies. Colorimetric Following the first concentra-
methylene blue-based counting assays were developed as tion, a ratio of 3:4 is used to
simple cell-counting assays with relatively high through- construct the subsequent serial
dilutions
put and relatively low cost (Felice et al. 2009; Oliver et al.
1989). However, the requirement of the elution step in these
Table 2 Chosen arbitrary values seeded to assess the performance of
processes results in variations in readings and requires inten-
the assay
sive optimization efforts (Felice et al. 2009).
In accordance with these shortcomings, we aimed to Concentration number Chosen arbitrary values (seeded
count (cells/ml) ± DMSO treat-
develop an easy method that would only require daily used ment)
reagents in cell culture while still providing a close effi-
ciency to that of the other developed approaches. Applica- 1 200,000 – DMSO
tions of such an approach can vary to include proliferation 2 200,000 + DMSO
studies, cytotoxicity studies, seeding count optimizations, 3 150,000 – DMSO
and treatment optimizations. The capacity of this method as 4 150,000 + DMSO
a cell counting and toxicity assay will be assessed through 5 100,000 − DMSO
the application of DMSO to lung and breast cancer cells. 6 100,000 + DMSO
DMSO is a common reagent used in various cell-culture 7 50,000 − DMSO
applications including the preparation of treatments and 8 50,000 + DMSO
cryopreservation. However, increased exposure to DMSO Each concentration is seeded with (+) or without (−) DMSO treat-
can lead to increased cell damage resulting in pseudo-effects ment to investigate the potential use of the assay for cytotoxicity stud-
in treatments as well as cell loss in cryopreservation. ies
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Histochemistry and Cell Biology
Densities were then adjusted for the final count per well by and very low confluency) were plated in a 96-well plate.
multiplying by the suspension volume in each well. Accordingly, the rough borderlines of the standard curve
range were determined, ~ 35,000 cells/well at full confluency
Trypan blue staining and ~ 5000 cells/well at low confluency, for both cell lines.
This range was then used to identify the dynamic range of
The cells were fixed with 4% Paraformaldehyde (PFA) the assay by testing its accuracy at the two previously iden-
(Sigma, USA) (prepared in PBS) for 20 min at room tem- tified borderlines. Subsequently, a serial dilution ratio (3:4
perature followed by 2 washed with PBS. The cells were dilution starting from 35,000 cells/well) was chosen to create
then stained with 0.1, 0.25, or 0.4% Trypan Blue (Sigma, a standard curve spanning the chosen range (Table 1). The
USA) diluted in PBS for 10, 30, or 60 min at room tempera- cells were plated according to the dilutions and monitored
ture. The cells were then washed twice with PBS to com- regularly for signs of adherence and adaptation of natural
pletely remove any remaining trypan blue residues and avoid morphology in culture. Once the cells fulfilled these condi-
an artifact signal. The absorbance was then measured using tions (after 6 h for A549 cells and 20 h for MDA cells), the
BioTek’s plate reader ELx808 at absorbance of 450 nm, cells are directly fixed for staining to avoid increase in cell
490 nm, and 630 nm. count.
Beyond fixing the cells, the application of PFA suffi-
Microscopy ciently permeabilizes the cell membrane to allow for the
entrapment of trypan blue intracellularly and the full cov-
Some of the images were acquired with Olympus IX53 erage of the cell body (Fig. 1). This method of staining
inverted microscope equipped with Olympus DP75 cam- results in dye density signals proportional to the volume
era (resolution of 5760 × 3600 pixels and pixel size of
5.86 × 5.86 µm) with Cell Sens Entry software (version
1.17). Images were acquired with 10X (numerical aperture
0.50) objective lenses at 1600 × 1200 pixels and 72.0 1/in
resolution in both X and Y axis. The rest of the images were
acquired using Olympus IX73 inverted microscope with
Olympus DP22 camera (resolution of 1920 × 1440 pixels
and pixel size of 3.69 × 3.69 µm) and DP camera acquisition
software. Images were acquired with 4X (numerical aperture
0.13) or at 1920 × 1440 pixels resolution.
Statistical analysis
Results
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Histochemistry and Cell Biology
and thickness of the cell; rounded cells are less spread but Triton X-100) to lightly permeabilize cell membrane and
thicker resulting in a darker shade of blue and the opposite increase dye internalization.
for cells that adapted to the normal morphology. This bal- To achieve the optimum staining procedure, several
ance between color density and surface area coverage com- parameters were optimized (Fig. 2). Initially, the staining
pensates for differences in cell morphologies and allows for resulting from ascending concentrations of trypan blue
a better cell-count estimation. (0.1, 0.25, and 0.4%) was investigated showing a positive
Staining duration was optimized over 0.5, 1, 2, 5 h, and concordance between the concentration of trypan blue and
overnight. As shown in Fig. 2, although the trypan blue sig- dye absorption (Fig. 2a). With the use of the highest con-
nal could be visualized even at shorter staining duration, centration, 0.4% of trypan blue, the staining duration was
the strength of the signal directly correlated with the stain- optimized over 10, 30, and 60 min (Fig. 2b). Positive cor-
ing duration. Therefore, to achieve the best visualization of relation was similarly observed between the staining dura-
the cells, overnight staining was applied to the subsequent tion and dye absorption. The additional permeabilization
experiments. Inefficiencies in the trypan blue internaliza- of the cells with 0.5% Triton-X100 prior to the staining
tion into the cells might require optimization of the fixa- was found to further increase trypan blue uptake (Fig. 2c).
tion method and staining duration. Otherwise, one might Therefore, permeabilization with Triton X-100 can be used
consider the application of a highly diluted detergent (e.g., to reduce the staining duration; 30 min dye uptake by Tri-
ton X-100 permeabilized cells closely approaches that of
Fig. 2 Optimization of trypan blue staining parameters including a Triton X-100, and d absorbance acquisition wavelength. Data points
trypan blue concentration (0.1, 0.25, and 0.4% trypan blue), b stain- presented as mean± SEM
ing duration (10, 30, and 60 min), c pre-permeabilization with 0.5%
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Histochemistry and Cell Biology
non-permeabilized cells stained for 1 h. Taken together, Standard curve accuracy verification
the optimum staining conditions were found to be staining
with 0.4% trypan blue at room temperature for 30 min if The gradual reduction in cell density along the standard
preceded by 20 min of Triton X-100 permeabilization or curve serial dilutions and the corresponding decrease in
1 h without permeabilization. trypan blue staining were visually verified using phase
Furthermore, absorbance measurement at the three dif- contrast microscopy (Fig. 3). The trypan blue absorbance
ferent wavelengths (450, 490, and 630 nm) was found to signal was then quantified using BioTek’s plate reader
provide sufficient signal to estimate cell count, indicating the Elx808. As seen in the absorbance measurements of the
flexibility of the assay (Fig. 2d). However, as the absorbance standard curves for both cell lines (Fig. 4a, b), a significant
measurement at wavelength of 630 nm provided the strong- correlation [correlation results for the A549 cell line: Pear-
est signal, and the highest correlation and accuracy, it was son’s correlation: 0.9971; p < 0.0001; goodness of fit (R2):
used in this paper for all subsequent measurements. 0.9942; correlation results for the MDA-MB-231 cell line:
Pearson’s correlation: 0.9919, p < 0.0001; goodness of fit
Fig. 3 Standard curve serial densities of A549 cells before and after fixation and staining with trypan blue. Scale bars representing 200 µm.
Images were taken at a 4X magnification using Olympus IX73 inverted microscope
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Cytotoxicity assay
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Fig. 5 a Representative image of hemocytometer grid taken for tradi- obtained using haemocytometer and the new trypan blue assay. Data
tional hemocytometer counting and comparison between cell count, b points presented as mean± SEM (horizontal error bars representing
A549 (Pearson correlation: 0.9931 and p value for is > 0.0001), and SEM of haemocytometer count while the vertical ones representing
c MDA-MB-231 cells (Pearson correlation: 0.9866 and p < 0.0001) that of the new trypan blue assay)
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the haemocytometer and at a faster rate and economic cost. DeBlois R W, Bean P C (1970) Counting and sizing of submicron par-
Moreover, this assay could potentially be modified and ticles by the resistive pulse technique. Rev Sci Instrum 41(7):909–
916. https://doi.org/10.1063/1.1684724
expanded to other cell viability exclusion dyes with simi- Felice DL, Sun J, Liu RH (2009) A modified methylene blue assay
lar properties to those of trypan blue according to their for accurate cell counting. J Funct Foods 1:109–118. https://doi.
availability in the lab, further increasing the feasibility org/10.1016/j.jff.2008.09.014
of the assay. Galvao JDB, Tilley M, Normando E, Duchen MR, Cordeiro MF (2014)
Unexpected low-dose toxicity of the universal solvent DMSO.
FASEB J 28:1317–1330
Acknowledgements R.H. is funded by Al Jalila Foundation Maioli E, Torricelli C, Fortino V, Carlucci F, Tommassini V, Pacini
(AJF201741), University of Sharjah and Boehringer Ingelheim A (2009) Critical appraisal of the MTT assay in the presence of
(120102). We thank Dangoor Education for supporting this work. rottlerin and uncouplers. Biol Proced Online 11:227–240
Mosmann T (1983) Rapid colorimetric assay for cellular growth and
OpenAccess This article is distributed under the terms of the Crea- survival: application to proliferation and cytotoxicity assays. J
tive Commons Attribution 4.0 International License (http://creativeco Immunol Methods 65:55–63
mmons.org/licenses/by/4.0/), which permits unrestricted use, distribu- Notman RNM, O’Malley B, Anwar J (2006) Molecular basis for
tion, and reproduction in any medium, provided you give appropriate dimethylsulfoxide (DMSO) action on lipid membranes. J Am
credit to the original author(s) and the source, provide a link to the Chem Soc 128:13982–13983
Creative Commons license, and indicate if changes were made. Oliver MH, Harrison NK, Bishop JE, Cole PJ, Laurent GJ (1989) A
rapid and convenient assay for counting cells cultured in micro-
well plates: application for assessment of growth factors. J Cell
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