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ORCIDThomas LaFramboise
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- affiliation: Case Western Reserve University, USA
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2020 – today
- 2024
[j13]Xuan Ma
, Jenný Brynjarsdóttir, Thomas LaFramboise:
A double Pólya-Gamma data augmentation scheme for a hierarchical Negative Binomial - Binomial data model. Comput. Stat. Data Anal. 199: 108009 (2024)- 2022
- [j12]Sirvan Khalighi, Peronne Joseph, Deepak Babu, Salendra Singh, Thomas LaFramboise, Kishore Guda, Vinay Varadan:
SYSMut: decoding the functional significance of rare somatic mutations in cancer. Briefings Bioinform. 23(4) (2022)
2010 – 2019
- 2019
- [j11]Janet Wang, Thomas LaFramboise:
CytoConverter: a web-based tool to convert karyotypes to genomic coordinates. BMC Bioinform. 20(1): 467:1-467:6 (2019) - 2017
- [j10]Colleen M. Bosworth, Sneha Grandhi, Meetha P. Gould, Thomas LaFramboise:
Detection and quantification of mitochondrial DNA deletions from next-generation sequence data. BMC Bioinform. 18(S-12): 29-36 (2017) - [j9]Daniel M. Savel, Thomas LaFramboise, Ananth Grama, Mehmet Koyutürk:
Pluribus - Exploring the Limits of Error Correction Using a Suffix Tree. IEEE ACM Trans. Comput. Biol. Bioinform. 14(6): 1378-1388 (2017) - [j8]M. Khalid Khan Niazi, Keluo Yao, Debra L. Zynger, Steven K. Clinton, James Chen, Mehmet Koyutürk, Thomas LaFramboise, Metin N. Gurcan:
Visually Meaningful Histopathological Features for Automatic Grading of Prostate Cancer. IEEE J. Biomed. Health Informatics 21(4): 1027-1038 (2017) - 2015
- [j7]Matthew Ruffalo, Holleh Husseinzadeh, Hideki Makishima, Bartlomiej Przychodzen, Mohamed Ashkar, Mehmet Koyutürk, Jaroslaw P. Maciejewski, Thomas LaFramboise:
Whole-exome sequencing enhances prognostic classification of myeloid malignancies. J. Biomed. Informatics 58: 104-113 (2015) - 2013
- [c4]Daniel M. Savel, Thomas LaFramboise, Ananth Grama, Mehmet Koyutürk:
Suffix-Tree Based Error Correction of NGS Reads Using Multiple Manifestations of an Error. BCB 2013: 351 - [c3]Gürkan Bebek, Mehmet Koyutürk, Thomas LaFramboise, Benjamin J. Raphael, Mark R. Chance:
Session introduction. Pacific Symposium on Biocomputing 2013: 307-309 - 2012
- [j6]Matthew Ruffalo, Mehmet Koyutürk, Soumya Ray, Thomas LaFramboise:
Accurate estimation of short read mapping quality for next-generation genome sequencing. Bioinform. 28(18): 349-355 (2012) - 2011
- [j5]Matthew Ruffalo, Thomas LaFramboise, Mehmet Koyutürk:
Comparative analysis of algorithms for next-generation sequencing read alignment. Bioinform. 27(20): 2790-2796 (2011) - 2010
- [j4]Ninad Dewal, Matthew L. Freedman, Thomas LaFramboise, Itsik Pe'er:
Power to detect selective allelic amplification in genome-wide scans of tumor data. Bioinform. 26(4): 518-528 (2010) - [c2]Gökhan Yavas, Mehmet Koyutürk, Thomas LaFramboise:
Optimization Algorithms for Identification and Genotyping of Copy Number Polymorphisms in Human Populations. PRIB 2010: 74-85 - [c1]Gökhan Yavas, Mehmet Koyutürk, Z. Meral Özsoyoglu, Meetha P. Gould, Thomas LaFramboise:
COKGEN: A Software for the Identification of Rare Copy Number Variation from SNP Microarrays. Pacific Symposium on Biocomputing 2010: 371-382
2000 – 2009
- 2009
- [j3]Thomas LaFramboise, Wendy Winckler, Roman K. Thomas:
A flexible rank-based framework for detecting copy number aberrations from array data. Bioinform. 25(6): 722-728 (2009) - 2005
- [j2]Thomas LaFramboise, Barbara A. Weir, Xiaojun Zhao, Rameen Beroukhim, Cheng Li, David Harrington, William R. Sellers, Matthew Meyerson:
Allele-Specific Amplification in Cancer Revealed by SNP Array Analysis. PLoS Comput. Biol. 1(6) (2005) - 2004
- [j1]Raji Balasubramanian, Thomas LaFramboise, Denise Scholtens, Robert Gentleman:
A graph-theoretic approach to testing associations between disparate sources of functional genomics data. Bioinform. 20(18): 3353-3362 (2004)
Coauthor Index
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