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2020 – today
- 2021
[j35]Mercè Llabrés
, Francesc Rosselló, Gabriel Valiente:
The Generalized Robinson-Foulds Distance for Phylogenetic Trees. J. Comput. Biol. 28(12): 1181-1195 (2021)- [i26]Tomás M. Coronado, Arnau Mir, Francesc Rosselló:
Explicit solution of divide-and-conquer dividing by a half recurrences with polynomial independent term. CoRR abs/2111.12313 (2021) - 2020
- [j34]Tomás M. Coronado, Arnau Mir, Francesc Rosselló, Lucía Rotger:
On Sackin's original proposal: the variance of the leaves' depths as a phylogenetic balance index. BMC Bioinform. 21(1): 154 (2020) - [j33]Adrià Alcalà, Ricardo Alberich, Mercè Llabrés, Francesc Rosselló, Gabriel Valiente:
AligNet: alignment of protein-protein interaction networks. BMC Bioinform. 21-S(6): 265 (2020) - [j32]Mercè Llabrés, Gabriel Riera, Francesc Rosselló, Gabriel Valiente:
Alignment of biological networks by integer linear programming: virus-host protein-protein interaction networks. BMC Bioinform. 21-S(6): 434 (2020) - [c22]Mercè Llabrés, Francesc Rosselló, Gabriel Valiente:
A Generalized Robinson-Foulds Distance for Clonal Trees, Mutation Trees, and Phylogenetic Trees and Networks. BCB 2020: 13:1-13:10 - [i25]Tomás M. Coronado, Arnau Mir, Francesc Rosselló:
Squaring within the Colless index yields a better balance index. CoRR abs/2007.14731 (2020)
2010 – 2019
- 2019
- [i24]Tomás M. Coronado, Francesc Rosselló:
The minimum value of the Colless index. CoRR abs/1903.11670 (2019) - [i23]Tomás M. Coronado, Mareike Fischer, Lina Herbst, Francesc Rosselló, Kristina Wicke:
On the minimum value of the Colless index and the bifurcating trees that achieve it. CoRR abs/1907.05064 (2019) - 2018
- [j31]Bruno Fosso, Graziano Pesole, Francesc Rosselló, Gabriel Valiente:
Unbiased Taxonomic Annotation of Metagenomic Samples. J. Comput. Biol. 25(3): 348-360 (2018) - [c21]Tomás M. Coronado, Gabriel Riera, Francesc Rosselló:
The Fair Proportion Is a Shapley Value on Phylogenetic Networks Too. Enjoying Natural Computing 2018: 77-87 - [i22]Arnau Mir, Francesc Rosselló, Lucia Rotger:
Sound Colless-like balance indices for multifurcating trees. CoRR abs/1805.01329 (2018) - 2017
- [c20]Bruno Fosso, Graziano Pesole, Francesc Rosselló, Gabriel Valiente:
Unbiased Taxonomic Annotation of Metagenomic Samples. ISBRA 2017: 162-173 - 2015
- [j30]Gabriel Cardona, Joan Carles Pons, Francesc Rosselló:
A reconstruction problem for a class of phylogenetic networks with lateral gene transfers. Algorithms Mol. Biol. 10: 28 (2015) - 2014
- [j29]Adrià Alcalà, Mercè Llabrés, Francesc Rosselló, Pau Rullan:
Tree-Child Cluster Networks. Fundam. Informaticae 134(1-2): 1-15 (2014) - 2013
- [j28]Gabriel Cardona, Arnau Mir, Francesc Rosselló Llompart, Lucia Rotger, David Sanchez:
Cophenetic metrics for phylogenetic trees, after Sokal and Rohlf. BMC Bioinform. 14: 3 (2013) - [i21]Gabriel Cardona, Arnau Mir, Francesc Rosselló:
The expected value of the squared euclidean cophenetic metric under the Yule and the uniform models. CoRR abs/1301.5131 (2013) - 2012
- [j27]Gabriel Cardona, Arnau Mir, Francesc Rosselló:
The expected value under the Yule model of the squared path-difference distance. Appl. Math. Lett. 25(12): 2031-2036 (2012) - [i20]Arnau Mir, Francesc Rosselló, Lucia Rotger:
A new balance index for phylogenetic trees. CoRR abs/1202.1223 (2012) - [i19]Adria Alcala Mena, Francesc Rosselló:
Ternary graph isomorphism in polynomial time, after Luks. CoRR abs/1209.0871 (2012) - 2011
- [j26]Gabriel Cardona, Mercè Llabrés, Francesc Rosselló, Gabriel Valiente:
Comparison of Galled Trees. IEEE ACM Trans. Comput. Biol. Bioinform. 8(2): 410-427 (2011) - 2010
- [j25]Gabriel Cardona, Mercè Llabrés, Francesc Rosselló, Gabriel Valiente:
Path lengths in tree-child time consistent hybridization networks. Inf. Sci. 180(3): 366-383 (2010) - [c19]Gabriel Cardona, Mercè Llabrés, Francesc Rosselló:
Two Results on Distances for Phylogenetic Networks. IWPACBB 2010: 93-100 - [c18]Arnau Mir, Francesc Rosselló:
The Median of the Distance between Two Leaves in a Phylogenetic Tree. IWPACBB 2010: 131-135 - [i18]Arnau Mir, Francesc Rosselló:
The median of the distance between two leaves in a phylogenetic tree. CoRR abs/1002.1828 (2010)
2000 – 2009
- 2009
- [j24]Ricardo Alberich, Gabriel Cardona, Francesc Rosselló, Gabriel Valiente:
An algebraic metric for phylogenetic trees. Appl. Math. Lett. 22(9): 1320-1324 (2009) - [j23]Jaume Casasnovas, Francesc Rosselló:
Scalar and fuzzy cardinalities of crisp and fuzzy multisets. Int. J. Intell. Syst. 24(6): 587-623 (2009) - [j22]Gabriel Cardona, Mercè Llabrés, Francesc Rosselló, Gabriel Valiente:
Metrics for Phylogenetic Networks I: Generalizations of the Robinson-Foulds Metric. IEEE ACM Trans. Comput. Biol. Bioinform. 6(1): 46-61 (2009) - [j21]Gabriel Cardona, Mercè Llabrés, Francesc Rosselló, Gabriel Valiente:
Metrics for Phylogenetic Networks II: Nodal and Triplets Metrics. IEEE ACM Trans. Comput. Biol. Bioinform. 6(3): 454-469 (2009) - [j20]Gabriel Cardona, Francesc Rosselló, Gabriel Valiente:
Comparison of Tree-Child Phylogenetic Networks. IEEE ACM Trans. Comput. Biol. Bioinform. 6(4): 552-569 (2009) - [j19]Gabriel Cardona, Mercè Llabrés, Francesc Rosselló, Gabriel Valiente:
On Nakhleh's Metric for Reduced Phylogenetic Networks. IEEE ACM Trans. Comput. Biol. Bioinform. 6(4): 629-638 (2009) - [i17]Gabriel Cardona, Mercè Llabrés, Francesc Rosselló, Gabriel Valiente:
The comparison of tree-sibling time consistent phylogenetic networks is graph isomorphism-complete. CoRR abs/0902.4640 (2009) - [i16]Francesc Rosselló, Gabriel Valiente:
All that Glisters is not Galled. CoRR abs/0904.2448 (2009) - [i15]Gabriel Cardona, Mercè Llabrés, Francesc Rosselló, Gabriel Valiente:
Comparison of Galled Trees. CoRR abs/0906.1166 (2009) - [i14]Arnau Mir, Francesc Rosselló:
The mean value of the squared path-difference distance for rooted phylogenetic trees. CoRR abs/0906.2470 (2009) - 2008
- [j18]Gabriel Cardona, Mercè Llabrés, Francesc Rosselló, Gabriel Valiente:
A distance metric for a class of tree-sibling phylogenetic networks. Bioinform. 24(13): 1481-1488 (2008) - [j17]Gabriel Cardona, Francesc Rosselló, Gabriel Valiente:
A perl package and an alignment tool for phylogenetic networks. BMC Bioinform. 9 (2008) - [j16]Gabriel Cardona, Francesc Rosselló, Gabriel Valiente:
Extended Newick: it is time for a standard representation of phylogenetic networks. BMC Bioinform. 9 (2008) - [i13]Gabriel Cardona, Mercè Llabrés, Francesc Rosselló, Gabriel Valiente:
A Distance Metric for Tree-Sibling Time Consistent Phylogenetic Networks. CoRR abs/0803.2904 (2008) - [i12]Gabriel Cardona, Mercè Llabrés, Francesc Rosselló, Gabriel Valiente:
Nodal distances for rooted phylogenetic trees. CoRR abs/0806.2035 (2008) - [i11]Gabriel Cardona, Mercè Llabrés, Francesc Rosselló, Gabriel Valiente:
Path lengths in tree-child time consistent hybridization networks. CoRR abs/0807.0087 (2008) - 2007
- [c17]Liliana Félix, Francesc Rosselló, Gabriel Valiente:
Reconstructing Metabolic Pathways by Bidirectional Chemical Search. CMSB 2007: 217-232 - [i10]Gabriel Cardona, Francesc Rosselló, Gabriel Valiente:
Tripartitions do not always discriminate phylogenetic networks. CoRR abs/0707.2376 (2007) - [i9]Gabriel Cardona, Francesc Rosselló, Gabriel Valiente:
Comparison of Tree-Child Phylogenetic Networks. CoRR abs/0708.3499 (2007) - [i8]Gabriel Cardona, Francesc Rosselló, Gabriel Valiente:
A Perl Package and an Alignment Tool for Phylogenetic Networks. CoRR abs/0711.3628 (2007) - 2006
- [j15]Francesc Rosselló, Gabriel Valiente:
An algebraic view of the relation between largest common subtrees and smallest common supertrees. Theor. Comput. Sci. 362(1-3): 33-53 (2006) - [i7]Francesc Rosselló, Gabriel Valiente:
An Algebraic View of the Relation between Largest Common Subtrees and Smallest Common Supertrees. CoRR abs/cs/0604108 (2006) - [i6]Jairo Rocha, Francesc Rosselló, Joan Segura:
Compression ratios based on the Universal Similarity Metric still yield protein distances far from CATH distances. CoRR abs/q-bio/0603007 (2006) - [i5]Francesc Rosselló, Gabriel Valiente:
The transposition distance for phylogenetic trees. CoRR abs/q-bio/0604024 (2006) - 2005
- [j14]Wiktor Bartol, Jaume Casasnovas, Francesc Rosselló:
Mono-unary algebras are uniquely determined by their lattices of fuzzy weak subalgebras. Fuzzy Sets Syst. 149(2): 349-367 (2005) - [j13]Jaume Casasnovas, Francesc Rosselló:
Averaging fuzzy biopolymers. Fuzzy Sets Syst. 152(1): 139-158 (2005) - [j12]Mercè Llabrés, Francesc Rosselló:
The uniqueness condition for the double pushout transformation of algebras. Inf. Sci. 171(1-3): 93-124 (2005) - [c16]Francesc Rosselló, Gabriel Valiente:
Graph Transformation in Molecular Biology. Formal Methods in Software and Systems Modeling 2005: 116-133 - [c15]Liliana Félix, Gabriel Valiente, Francesc Rosselló:
Optimal Artificial Chemistries and Metabolic Pathways. ENC 2005: 298-305 - [c14]Jaume Casasnovas, Francesc Rosselló:
Fuzzy P systems and their applications in computational biology. EUSFLAT Conf. 2005: 1112-1117 - [i4]Mercè Llabrés, Jairo Rocha, Francesc Rosselló, Gabriel Valiente:
On the Ancestral Compatibility of Two Phylogenetic Trees with Nested Taxa. CoRR abs/cs/0505086 (2005) - 2004
- [j11]Mercè Llabrés, Francesc Rosselló:
A new family of metrics for biopolymer contact structures. Comput. Biol. Chem. 28(1): 21-37 (2004) - [j10]Ricardo Alberich, Mercè Llabrés, Francesc Rosselló:
Single-Pushout Transformation Of Total Algebras. Int. J. Found. Comput. Sci. 15(1): 205-222 (2004) - [j9]Jaume Casasnovas, Joe Miró, Manuel Moya, Francesc Rosselló:
An Approach To Membrane Computing Under Inexactitude. Int. J. Found. Comput. Sci. 15(6): 841-864 (2004) - [j8]Wiktor Bartol, Joe Miró, Konrad Pióro, Francesc Rosselló:
On the coverings by tolerance classes. Inf. Sci. 166(1-4): 193-211 (2004) - [j7]Francesc Rosselló:
Reidys' and Stadler's metricsfor RNA contact structures. Math. Comput. Model. 40(7-8): 771-776 (2004) - [c13]Francesc Rosselló, Gabriel Valiente:
Analysis of Metabolic Pathways by Graph Transformation. ICGT 2004: 70-82 - [c12]Liliana Félix, Francesc Rosselló, Gabriel Valiente:
Artificial Chemistries and Metabolic Pathways. Spanish Bioinformatics Conference 2004: 56-59 - [c11]Mercè Llabrés, Francesc Rosselló, Gabriel Valiente:
On Supertrees of Phylogenetic Trees. Spanish Bioinformatics Conference 2004: 142-145 - [c10]Francesc Rosselló, Gabriel Valiente:
Chemical Graphs, Chemical Reaction Graphs, and Chemical Graph Transformation. GraBaTs 2004: 157-166 - [i3]Jaume Casasnovas, Joe Miró, Manuel Moya, Francesc Rosselló:
An approach to membrane computing under inexactitude. CoRR cs.OH/0403027 (2004) - 2003
- [i2]Mercè Llabrés, Francesc Rosselló:
Modelling Biochemical Operations on RNA Secondary Structures. CoRR cs.CE/0306016 (2003) - [i1]Mercè Llabrés, Francesc Rosselló:
A family of metrics on contact structures based on edge ideals. CoRR cs.DM/0306097 (2003) - 2002
- [j6]Jaume Casasnovas, Miquel Monserrat, Francesc Rosselló:
On the semilattice of inner extensions of a fuzzy partial algebra. Fuzzy Sets Syst. 127(3): 383-390 (2002) - [j5]Peter Burmeister, Mercè Llabrés, Francesc Rosselló:
Pushout Complements for Partly Total Algebras. Math. Struct. Comput. Sci. 12(2): 177-201 (2002) - 2001
- [c9]Mercè Llabrés, Francesc Rosselló:
Towards a Double Pushout Transformation of Algebras. GETGRATS Closing Workshop 2001: 265-276
1990 – 1999
- 1999
- [j4]Peter Burmeister, Miquel Monserrat, Francesc Rosselló, Gabriel Valiente:
Algebraic Transformation of Unary Partial Algebras II: Single-Pushout Approach. Theor. Comput. Sci. 216(1-2): 311-362 (1999) - [c8]José Miró-Julià, Francesc Rosselló:
PNA-enhanced DNA computing. CEC 1999: 955-959 - 1998
- [c7]Wiktor Bartol, Xavier Caicedo, Francesc Rosselló:
Syntactical Content of Finite Approximations of Partial Algebras. Rough Sets and Current Trends in Computing 1998: 408-415 - [c6]Mercè Llabrés, Francesc Rosselló:
Pushout Complements for Arbitrary Partial Algebras. TAGT 1998: 131-144 - 1997
- [j3]Mercè Llabrés, Francesc Rosselló:
Double-Pushout Hypergraph Rewriting Using Total Conformisms. Fundam. Informaticae 30(2): 193-226 (1997) - [j2]Peter Burmeister, Francesc Rosselló, Joan Torrens, Gabriel Valiente:
Algebraic Transformation of Unary Partial Algebras I: Double-Pushout Approach. Theor. Comput. Sci. 184(1-2): 145-193 (1997) - 1995
- [j1]Miquel Monserrat, Francesc Rosselló, Joan Torrens:
When is a Category of Many-Sorted Partial Algebras Cartesian-Closed? Int. J. Found. Comput. Sci. 6(1): 51-66 (1995) - [c5]Miquel Monserrat, Francesc Rosselló, Joan Torrens, Gabriel Valiente:
Hypergraph rewriting using conformisms. SEGRAGRA 1995: 207-214 - 1994
- [c4]Ricardo Alberich, Peter Burmeister, Francesc Rosselló, Gabriel Valiente, Boleslaw Wojdylo:
A Partial Algebras Approach to Graph Transformation. TAGT 1994: 1-15 - 1993
- [c3]Felipe Cucker, Francesc Rosselló:
Recursiveness over the Complex Numbers is Time-Bounded. FSTTCS 1993: 260-267 - 1992
- [c2]Miquel Monserrat, Francesc Rosselló, Joan Torrens:
A Note on Information Systems Associated to Termal Algebras. IPMU 1992: 63-72 - [c1]Felipe Cucker, Francesc Rosselló:
On the Complexity of Some Problems for the Blum, Shub & Smale Model. LATIN 1992: 117-129
Coauthor Index
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