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PeerJ Computer Science, Volume 2
Volume 2, 2016
- Ofer Biller, Irina Rabaev, Klara Kedem, Its'hak Dinstein, Jihad El-Sana:
Evolution maps and applications. e39 - Abe Kazemzadeh, James Gibson, Panayiotis G. Georgiou, Sungbok Lee, Shrikanth S. Narayanan:
A Socratic epistemology for verbal emotional intelligence. e40 - Yan Wu, Srinivasan Venkatramanan, Dah Ming Chiu:
Research collaboration and topic trends in Computer Science based on top active authors. e41 - Alexandru Topirceanu, Mihai Udrescu, Mircea Vladutiu, Radu Marculescu:
Tolerance-based interaction: a new model targeting opinion formation and diffusion in social networks. e42 - Michael Maass, Adam Sales, Benjamin Chung, Joshua Sunshine:
A systematic analysis of the science of sandboxing. e43
- Patrick Golden, Ryan Shaw:
Nanopublication beyond the sciences: the PeriodO period gazetteer. e44 - Malgorzata Habich, Sergej Djuranovic, Pawel Szczesny:
PATACSDB - the database of polyA translational attenuators in coding sequences. e45 - Timothy Nugent, Vassilis Plachouras, Jochen L. Leidner:
Computational drug repositioning based on side-effects mined from social media. e46 - Eli M. Dow:
Decomposed multi-objective bin-packing for virtual machine consolidation. e47
- Stefan Wagner, Asim Abdulkhaleq, Ivan Bogicevic, Jan-Peter Ostberg, Jasmin Ramadani:
How are functionally similar code clones syntactically different? An empirical study and a benchmark. e49 - Ivar Farup:
A computational framework for colour metrics and colour space transforms. e48 - Orlando Schwery, Brian C. O'Meara:
MonoPhy: a simple R package to find and visualize monophyly issues. e56 - Andrew MacDonald:
PhilDB: the time series database with built-in change logging. e52
- Oussama Metatla, Nick Bryan-Kinns, Tony Stockman, Fiore Martin:
Sonification of reference markers for auditory graphs: effects on non-visual point estimation tasks. e51 - Dragan D. Nikolic:
DAE Tools: equation-based object-oriented modelling, simulation and optimisation software. e54 - John Salvatier, Thomas V. Wiecki, Christopher Fonnesbeck:
Probabilistic programming in Python using PyMC3. e55 - Weijian Zhang, Nicholas J. Higham:
Matrix Depot: an extensible test matrix collection for Julia. e58 - Nicolas Durrande, James Hensman, Magnus Rattray, Neil D. Lawrence:
Detecting periodicities with Gaussian processes. e50 - Shlomi Dolev, Jonathan Goldfeld, Rami Puzis, Muni Venkateswarlu K.:
Efficient online detection of temporal patterns. e53 - Bo Xiao, Che-Wei Huang, Zac E. Imel, David C. Atkins, Panayiotis G. Georgiou, Shrikanth S. Narayanan:
A technology prototype system for rating therapist empathy from audio recordings in addiction counseling. e59
- Xiaoran Yan, Shang-Hua Teng, Kristina Lerman, Rumi Ghosh:
Capturing the interplay of dynamics and networks through parameterizations of Laplacian operators. e57 - Alex M. Clark, Nadia K. Litterman, Janice E. Kranz, Peter Gund, Kellan Gregory, Barry A. Bunin:
BioAssay templates for the semantic web. e61 - Jan B. F. van Erp, Maarten A. Hogervorst, Ysbrand D. van der Werf:
Toward physiological indices of emotional state driving future ebook interactivity. e60 - Marco Kuhrmann, Philipp Diebold, Jürgen Münch:
Software process improvement: a systematic mapping study on the state of the art. e62
- Nirmal Jonnalagedda, Susan Gauch, Kevin Labille, Sultan Alfarhood:
Incorporating popularity in a personalized news recommender system. e63 - Josep Cuadrado, Jordi Vilaplana, Jordi Mateo, Francesc Solsona, Sara Solsona, Josep Rius, Rui Alves, Miguel Camafort:
HBPF: a Home Blood Pressure Framework with SLA guarantees to follow up hypertensive patients. e69 - Mahawaga Arachchige Pathum Chamikara, Akalanka Galappaththi, Roshan Dharshana Yapa, Ruwan Dharshana Nawarathna, Saluka Ranasinghe Kodituwakku, Jagath Gunatilake, Aththanapola Arachchilage Chathranee Anumitha Jayathilake, Liwan H. Liyanage:
Fuzzy based binary feature profiling for modus operandi analysis. e65 - Johannes M. Schleicher, Michael Vögler, Christian Inzinger, Schahram Dustdar:
Smart Brix - a continuous evolution framework for container application deployments. e66 - Jordan Anaya:
OncoLnc: linking TCGA survival data to mRNAs, miRNAs, and lncRNAs. e67 - Axel Newe:
Enriching scientific publications with interactive 3D PDF: an integrated toolbox for creating ready-to-publish figures. e64 - Giovany Vega, Carlos J. Corrada-Bravo, T. Mitchell Aide:
Audio segmentation using Flattened Local Trimmed Range for ecological acoustic space analysis. e70 - Alexander Toet:
Alternating guided image filtering. e72
- Giuseppe Destefanis, Marco Ortu, Steve Counsell, Stephen Swift, Michele Marchesi, Roberto Tonelli:
Software development: do good manners matter? e73 - Justin Bedo, Benjamin Goudey, Jeremy Wazny, Ze-yu Zhou:
Information theoretic alignment free variant calling. e71
- Kyle T. Mandli, Aron J. Ahmadia, Marsha J. Berger, Donna A. Calhoun, David L. George, Yiannis Hadjimichael, David I. Ketcheson, Grady I. Lemoine, Randall J. LeVeque:
Clawpack: building an open source ecosystem for solving hyperbolic PDEs. e68 - Konstantin Kozlov, Alexander M. Samsonov, Maria Samsonova:
A software for parameter optimization with Differential Evolution Entirely Parallel method. e74 - Julian Zubek, Dariusz Plewczynski:
Complexity curve: a graphical measure of data complexity and classifier performance. e76 - Rytis Maskeliunas, Vidas Raudonis:
Are you ashamed? Can a gaze tracker tell? e75 - Rommel N. Carvalho, Kathryn B. Laskey, Paulo Cesar G. da Costa:
Uncertainty modeling process for semantic technology. e77 - Tobias Kuhn, Christine Chichester, Michael Krauthammer, Núria Queralt-Rosinach, Ruben Verborgh, George Giannakopoulos, Axel-Cyrille Ngonga Ngomo, Raffaele Viglianti, Michel Dumontier:
Decentralized provenance-aware publishing with nanopublications. e78 - Naga Durga Prasad Avirneni, Prem Kumar Ramesh, Arun K. Somani:
Managing contamination delay to improve Timing Speculation architectures. e79 - Alexander Toet:
Iterative guided image fusion. e80
- Kam D. Dahlquist, John David N. Dionisio, Ben G. Fitzpatrick, Nicole A. Anguiano, Anindita Varshneya, Britain J. Southwick, Mihir Samdarshi:
GRNsight: a web application and service for visualizing models of small- to medium-scale gene regulatory networks. e85 - Xiaoqian Liu, Tingshao Zhu:
Deep learning for constructing microblog behavior representation to identify social media user's personality. e81 - Gaëtan Podevijn, Rehan O'Grady, Carole Fantini-Hauwel, Marco Dorigo:
Investigating the effect of the reality gap on the human psychophysiological state in the context of human-swarm interaction. e82 - Lea A. I. Vaas, Gesa Witt, Björn Windshügel, Andrea Bosin, Giovanni Serra, Adrian Bruengger, Mathias Winterhalter, Philip Gribbon, Cindy J. Levy-Petelinkar, Manfred Kohler:
Electronic laboratory notebooks in a public-private partnership. e83 - Arfon M. Smith, Daniel S. Katz, Kyle E. Niemeyer:
Software citation principles. e86
- Clayton A. Davis, Giovanni Luca Ciampaglia, Luca Maria Aiello, Keychul Chung, Michael D. Conover, Emilio Ferrara, Alessandro Flammini, Geoffrey C. Fox, Xiaoming Gao, Bruno Gonçalves, Przemyslaw A. Grabowicz, Kibeom Hong, Pik-Mai Hui, Scott McCaulay, Karissa McKelvey, Mark R. Meiss, Snehal Patil, Chathuri Peli Kankanamalage, Valentin Pentchev, Judy Qiu, Jacob Ratkiewicz, Alex Rudnick, Benjamin Serrette, Prashant Shiralkar, Onur Varol, Lilian Weng, Tak-Lon Wu, Andrew J. Younge, Filippo Menczer:
OSoMe: the IUNI observatory on social media. e87 - Chen Zhang, Yuanzhu Chen, Cheng Li:
TCP adaptation with network coding and opportunistic data forwarding in multi-hop wireless networks. e89 - Dany Vohl, David G. Barnes, Christopher J. Fluke, Govinda R. Poudel, Nellie Georgiou-Karistianis, Amr H. Hassan, Yuri Benovitski, Tsz Ho Wong, Owen Kaluza, Toàn D. Nguyên, C. Paul Bonnington:
Large-scale comparative visualisation of sets of multidimensional data. e88 - Ranko Gacesa, David J. Barlow, Paul F. Long:
Machine learning can differentiate venom toxins from other proteins having non-toxic physiological functions. e90 - Javier Luis Cánovas Izquierdo, Jordi Cabot:
Collaboro: a collaborative (meta) modeling tool. e84 - Nikolaos Aletras, Dimitrios Tsarapatsanis, Daniel Preotiuc-Pietro, Vasileios Lampos:
Predicting judicial decisions of the European Court of Human Rights: a Natural Language Processing perspective. e93 - Lindsay Alexander Shaw, Jude Buckley, Paul M. Corballis, Christof Lutteroth, Burkhard C. Wünsche:
Competition and cooperation with virtual players in an exergame. e92
- Todd C. Pataky, Michihiko Koseki, Philip G. Cox:
Probabilistic biomechanical finite element simulations: whole-model classical hypothesis testing based on upcrossing geometry. e96 - Tak Yeon Lee, Benjamin B. Bederson:
Give the people what they want: studying end-user needs for enhancing the web. e91 - Gaëtan Benoit, Pierre Peterlongo, Mahendra Mariadassou, Erwan Drezen, Sophie Schbath, Dominique Lavenier, Claire Lemaitre:
Multiple comparative metagenomics using multiset k-mer counting. e94 - Peter T. Darch, Christine L. Borgman:
Ship space to database: emerging infrastructures for studies of the deep subseafloor biosphere. e97 - Georgios P. Katsikas, Marcel Enguehard, Maciej Kuzniar, Gerald Q. Maguire Jr., Dejan Kostic:
SNF: synthesizing high performance NFV service chains. e98 - Joss Whittle, Rita Borgo, Mark W. Jones:
Implementing generalized deep-copy in MPI. e95
- Gonzalo S. Nido, Ludovica Bachschmid-Romano, Ugo Bastolla, Alberto Pascual-García:
Learning structural bioinformatics and evolution with a snake puzzle. e100 - Kimio Kuramitsu:
Continuously revised assurance cases with stakeholders' cross-validation: a DEOS experience. e101 - José María Baydal-Bertomeu, Juan Vicente Durá-Gil, Ana Piérola-Orcero, Eduardo Parrilla Bernabé, Alfredo Ballester, Sandra Alemany-Munt:
A PCA-based bio-motion generator to synthesize new patterns of human running. e102
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