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ORCIDStefan Wuchty
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2020 – today
- 2024
[j14]Xiaodi Yang
, Stefan Wuchty, Zeyin Liang, Li Ji, Bingjie Wang, Jialin Zhu, Ziding Zhang, Yujun Dong:
Multi-modal features-based human-herpesvirus protein-protein interaction prediction by using LightGBM. Briefings Bioinform. 25(2) (2024)- 2023
- [j13]Yan Huang, Stefan Wuchty, Yuan Zhou, Ziding Zhang:
SGPPI: structure-aware prediction of protein-protein interactions in rigorous conditions with graph convolutional network. Briefings Bioinform. 24(2) (2023) - [i2]Minsu Park, Suman Kalyan Maity, Stefan Wuchty, Dashun Wang:
Interdisciplinary Papers Supported by Disciplinary Grants Garner Deep and Broad Scientific Impact. CoRR abs/2303.14732 (2023) - 2021
- [j12]Xiaodi Yang, Xianyi Lian, Chen Fu, Stefan Wuchty, Shiping Yang, Ziding Zhang:
HVIDB: a comprehensive database for human-virus protein-protein interactions. Briefings Bioinform. 22(2): 832-844 (2021) - [j11]Xiaodi Yang, Shiping Yang, Xianyi Lian, Stefan Wuchty, Ziding Zhang:
Transfer learning via multi-scale convolutional neural layers for human-virus protein-protein interaction prediction. Bioinform. 37(24): 4771-4778 (2021) - [c7]Xiaodi Yang, Ziding Zhang, Stefan Wuchty:
Multi-scale Convolutional Neural Networks for the Prediction of Human-virus Protein Interactions. ICAART (2) 2021: 41-48 - 2020
- [c6]Hassen Dhrif, Stefan Wuchty:
Stable Feature Selection for Gene Expression using Enhanced Binary Particle Swarm Optimization. ICAART (2) 2020: 437-444 - [c5]Hassen Dhrif, Verónica Bolón-Canedo, Stefan Wuchty:
Gene Subset Selection for Transfer Learning using Bilevel Particle Swarm Optimization. ICMLA 2020: 1317-1323
2010 – 2019
- 2019
- [c4]Hassen Dhrif, Luis G. Sánchez Giraldo, Miroslav Kubat, Stefan Wuchty:
A stable hybrid method for feature subset selection using particle swarm optimization with local search. GECCO 2019: 13-21 - [i1]Hassen Dhrif, Luis G. Sánchez Giraldo, Miroslav Kubat, Stefan Wuchty:
A Stable Combinatorial Particle Swarm Optimization for Scalable Feature Selection in Gene Expression Data. CoRR abs/1901.08619 (2019) - 2017
- [j10]J. Harry Caufield, Christopher Wimble, Shary Semarjit, Stefan Wuchty, Peter Uetz:
Bacterial protein meta-interactomes predict cross-species interactions and protein function. BMC Bioinform. 18(1): 171:1-171:14 (2017) - 2015
- [j9]Sawsan Khuri, Stefan Wuchty:
Essentiality and centrality in protein interaction networks revisited. BMC Bioinform. 16: 109:1-109:8 (2015) - [j8]Sarah L. Keasey, Mohan Natesan, Christine Pugh, Teddy Kamata, Stefan Wuchty, Robert G. Ulrich:
The road to linking genomics and proteomics of pathogenic bacteria: from binary protein complexes to interaction pathways. BMC Bioinform. 16(S-2): A9 (2015) - [c3]Mohamed Sordo, Mitsunori Ogihara, Stefan Wuchty:
Analysis of the Evolution of Research Groups and Topics in the ISMIR Conference. ISMIR 2015: 204-210 - 2013
- [j7]Stefan Wuchty, Dolores Arjona, Peter O. Bauer:
Important miRs of Pathways in Different Tumor Types. PLoS Comput. Biol. 9(1) (2013) - [c2]Yoo-Ah Kim, Raheleh Salari, Stefan Wuchty, Teresa M. Przytycka:
Module Cover - A New Approach to Genotype-Phenotype Studies. Pacific Symposium on Biocomputing 2013: 135-146 - 2011
- [j6]Yoo-Ah Kim, Stefan Wuchty, Teresa M. Przytycka:
Identifying Causal Genes and Dysregulated Pathways in Complex Diseases. PLoS Comput. Biol. 7(3) (2011) - 2010
- [j5]Serdar Bozdag, Aiguo Li, Stefan Wuchty, Howard A. Fine:
FastMEDUSA: a parallelized tool to infer gene regulatory networks. Bioinform. 26(14): 1792-1793 (2010) - [j4]Stefan Wuchty, Alice Zhang, Jennifer Walling, Susie Ahn, Aiguo Li, Martha Quezado, Carl Oberholtzer, Jean-Claude Zenklusen, Howard A. Fine:
Gene pathways and subnetworks distinguish between major glioma subtypes and elucidate potential underlying biology. J. Biomed. Informatics 43(6): 945-952 (2010) - [c1]Yoo-Ah Kim, Stefan Wuchty, Teresa M. Przytycka:
Simultaneous Identification of Causal Genes and Dys-Regulated Pathways in Complex Diseases. RECOMB 2010: 263-280
2000 – 2009
- 2009
- [j3]Yang Huang, Stefan Wuchty, Michael T. Ferdig, Teresa M. Przytycka:
Graph theoretical approach to study eQTL: a case study of Plasmodium falciparum. Bioinform. 25(12) (2009) - 2007
- [j2]Chengbang Huang, Faruck Morcos, Simon P. Kanaan, Stefan Wuchty, Danny Z. Chen, Jesús A. Izaguirre:
Predicting Protein-Protein Interactions from Protein Domains Using a Set Cover Approach. IEEE ACM Trans. Comput. Biol. Bioinform. 4(1): 78-87 (2007) - 2004
- [j1]Katja Wegner, Stephan Jansen, Stefan Wuchty, Ralph Gauges, Ursula Kummer:
combAlign: A protein sequence comparison algorithm considering recombinations. Silico Biol. 4(3): 243-254 (2004)
Coauthor Index
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