A virtual monitor for screen sharing

pix2tex: Using a ViT to convert images of equations into LaTeX code.

Web-based tool converts GitHub repository contents into a single formatted text file

A list of software for pangenomics

GenomeTools genome analysis system.

R-Package to connect to the Datawrapper-API

Successful Job Applications and Grants

A high-performance BigWig and BigBed library in Rust

Teselagen Open Source modules

Download FASTQ files from SRA or ENA repositories.

Converts a VCF file to a FASTA alignment provided a reference genome and a GFF file

Demo showing how to setup continuous integration deployment of an R Shinylive App on GitHub Pages through GitHub Actions

A tool to find sequencing data and metadata from public databases.

A template to launch RStudio inside a container with the local RStudio settings with docker-compose

convert alignment bam to pairwise alignment or multiple sequence alignment (msa) at genome specific region

fastest GTF/GFF-to-BED converter chilling around

A general approach to EDA

A 'ggplot2' implement of Venn Diagram.

Simple test framework for Nextflow pipelines

Advanced Python Mastery (course by @dabeaz)

User-friendly AI Interface (Supports Ollama, OpenAI API, ...)

High-performance JSON to GRON (greppable, flattened JSON) converter

Langchain + Docker + Neo4j + Ollama

Defense Against the Dark Arts

A feature-rich command-line audio/video downloader

The Google Cloud Developer's Cheat Sheet

Run any open-source LLMs, such as Llama, Gemma, as OpenAI compatible API endpoint in the cloud.