I'm a bioinformatician working on microbial (meta)genomics :DNA:
🤖 I like tinkering with nextflow:
📦 Some tools are available via Bioconda :
🧬 🚀 seqfu | ⛰️ bamtocov | 🖌️ dadaist2 | 🛠️ qax |
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Fast toolkit for FASTX manipulation and inspection | to extract coverage tracks from BAM files | to analyze 16s/ITS from reads to R | utilities for Qiime2 artifacts |
📖 I use GitHub also for training material
📓 microbiome bioinformatics | 🧔 Personal website | 💻 bash training | 🎥 Companion videos |
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Some tutorials | A small blog | Toy files to practice Bash | A Youtube channel |
I'm using Mastodon