Parallel and distributed processing for unsupervised patient phenotype representation

JA García Heano, F Precioso, P Staccini… - … Performance Computing …, 2019 - Springer
… In this paper, we describe the unsupervised learning … phenotype representations using a
mini-cluster with 14 Jetson TX2 in order to distribute training and to obtain a patient phenotype

Parallel and Distributed Processing for Unsupervised Patient Phenotype Representation

M Riveill - High Performance Computing: 5th Latin American …, 2019 - books.google.com
… to automated phenotype extractions [3]. In this paper, we describe the unsupervised learning
method for mining her data and build low-dimensional phenotype representations using a …

Parallel and Distributed Processing for Unsupervised Patient Phenotype Representation

JAJAG Henao, G Henao, F Precioso… - … COMPUTING …, 2018 - hal.science
… In this paper, we describe the unsupervised learning method for … phenotype representations
using a mini-cluster with 14 Jetson TX2 in order to distribute training and to obtain a patient

[PDF][PDF] Parallel and Distributed Processing for Unsupervised Patient Phenotype Representation

J GARCÍA H, F PRECIOSO, P STACCINI, M RIVEILL - researchgate.net
… In this paper, we describe the unsupervised learning method for … phenotype representations
using a mini-cluster with 14 Jetson TX2 in order to distribute training and to obtain a patient

Unsupervised representation learning on high-dimensional clinical data improves genomic discovery and prediction

T Yun, J Cosentino, B Behsaz, ZR McCaw, D Hill… - Nature Genetics, 2024 - nature.com
… accurate phenotyping 48 remains a core challenge. We proposed a general unsupervised
… Cases were defined as having at least one in-patient diagnosis or two out-patient diagnoses…

Deep representation learning of electronic health records to unlock patient stratification at scale

I Landi, BS Glicksberg, HC Lee, S Cherng… - NPJ digital …, 2020 - nature.com
unsupervised framework based on deep learning to process heterogeneous EHRs and derive
patient representations … diagnoses in the EHRs (ie, disease phenotyping 18 ). To this end, …

Enriching representation learning using 53 million patient notes through human phenotype ontology embedding

M Daniali, PD Galer, D Lewis-Smith… - Artificial intelligence in …, 2023 - Elsevier
… Our goal, however, is to provide unsupervised methods that are more robust and generalizable
to large-scale data. Given the increasing availability of electronic health records and …

Unsupervised extraction of phenotypes from cancer clinical notes for association studies

SG Stark, SL Hyland, MF Pradier, K Lehmann… - arXiv preprint arXiv …, 2019 - arxiv.org
… ’s EHR records to visualize the patients, we find that the representations exhibit a complex …
be performed in parallel. Since the sentence matrix is stored efficiently, each process does not …

[HTML][HTML] Deep representation learning of patient data from Electronic Health Records (EHR): A systematic review

Y Si, J Du, Z Li, X Jiang, T Miller, F Wang… - Journal of biomedical …, 2021 - Elsevier
parallel (which will increase training time). Also, RNNs only … clinical events (especially
phenotypes, comorbidities, and … In all forms of unsupervised learning, patient representations

Deep computational phenotyping

Z Che, D Kale, W Li, MT Bahadori, Y Liu - Proceedings of the 21th ACM …, 2015 - dl.acm.org
… variables and length T, we can represent it as a matrix X ∈ RP … (or diagnose) a patient after
each new observation while also … We use these subsequences to train a single unsupervised