Etiology of Neonatal Sepsis in Five Urban Hospitals in The Philippines
Etiology of Neonatal Sepsis in Five Urban Hospitals in The Philippines
Etiology of Neonatal Sepsis in Five Urban Hospitals in The Philippines
2
Copyright ® 2011 75
AUTHORS: Cecilia C. Maramba-Lazarte, MD1, Mary Ann C. Bunyi, MD2, Elizabeth E. Gallardo, MD3,
Jonathan G. Lim, MD4, Joanne J. Lobo, MD5, Cecille Y. Aguilar, MD1
University of the Philippine- Philippine General Hospital1, Philippine Children's Medical Center 2,,St. Louis University- Hospital
of the Sacred Heart3, Chong Hua Hospital4, Davao Doctor's Hospital5
CORRESPONDENCE:
Cecilia C. Maramba-Lazarte
Email: [email protected]
KEYWORDS
neonatal sepsis, neonatal infection
ABSTRACT
The most frequent cause of mortality in neonates is infections which include sepsis, meningitis, pneumonia,
diarrhea and tetanus. Approximately 1.6 million deaths due to neonatal infections occur annually in
developing countries. The causes of sepsis vary from one geographic area to another. Thus, it is important
to create a database for the Philippines regarding the etiologies of neonatal sepsis.
Objectives: The study was undertaken to determine the most common bacterial pathogens of neonatal
sepsis in the Philippines and the antibiotic sensitivity patterns of these pathogens.
Methods: A multicenter surveillance and chart review was conducted in five hospital sites for a period of
six months- from July to December 2006. All neonates less than or equal to 28 days who had positive
cultures from a sterile site and or had fulfilled the SIRS criteria as defined by the International Pediatric
Sepsis Consensus Conference in the presence of suspected or proven infection were included in the study.
Results: A total of 289 neonates fulfilled the criteria of sepsis. More than 61% of the patients had early
onset neonatal sepsis. The most common site of infection was the lungs, (57%), followed by sepsis without
an obvious site of infection (35%).
In 50% of patients, an organism was identified; gram-negative bacteria were the dominant bacteria found
(Pseudomonas, Burkholderia, Klebsiella) which comprised 94% of the bacteria isolated. Resistance patterns
varied among the different urban study centers. The Pseudomonas and Burkholderia isolates from the
Philippine General Hospital (PGH) were sensitive to ceftazidime. All Klebsiella isolates from St. Louis
University (SLU) were resistant to third generation cephalosporins. In contrast, Klebsiella isolates from
PGH and Davao were sensitive to third generation cephalosporins but resistant to piperacillin-tazobactam.
The overall mortality rate was 11%. Ampicillin and an aminoglycoside were the most common regimens
used but were only successful in less than 50% of cases.
Conclusion: Gram-negative organisms comprised the majority of the neonatal infections, with
Pseudomonas and Burkholderia being the most prevalent. Resistance patterns differed among the different
centers. Continuing surveillance of infections is still needed in order choose the most appropriate empiric
therapy for each center.
Table 2. Onset of infection neonatal sepsis in five urban hospitals in the Philippines.
Born in hospital Born in Born at home, Born at Total early Total late
Within 72 hrs hospital, Within 72 hrs home onset onset
(%) After 72 hrs (%) (%) > 72 hrs (%) <72 hrs (%) >72 hrs (%)
SLU 21 (100) 0 0 0 21 (100) 0 (0)
CHH 2 (11) 13 (72) 1 (6) 2 (11) 3 (17) 15 (83)
DDH 8 (35) 14 (61) 0 (0) 1 (4) 8 (35) 15 (65)
PCMC 0 1(2) 51(76) 15(22) 51 (76) 16 (24)
PGH 82 (51) 53 (33) 12 (7.5) 13 (8) 94 (59) 66 (41)
Total 113 (39) 81 (28) 63 (22) 31 (11) 177 (61) 112 (39)
Table 3. Site of infection of neonatal sepsis in five urban hospitals in the Philippines.
Study Clinical sepsis Pneumonia Meningitis NEC Cellulitis Urinary Infective endo-
center without focus (%) tract carditis
SLU 4 16 0 0 0 0 0
CHH 11 5 0 0 1 1 0
DDH 12 6 1 1 0 3 1
PCMC 28 39 0 0 0 0 0
PGH 45 98 3 13 1 0 0
Total 100(35%) 164(57%) 4(1%) 14(5%) 2(<1%) 4(1%) 1(<1%)
Table 6. Organisms isolated and sensitivity pattern from pathogens found in St. Louis University
Hospital in patients diagnosed with neonatal sepsis.
Organism Isolated All isolates Sensitive All isolates Resistant Variable No. of
Isolates/No.
tested
Klebsiella oxytoca Cefepime Amikacin, Ampicillin, Ciprofloxacin (50% 3/3
Ceftriaxone, Piperacillin- sens)
Tazobactam, Meropenem,
Imipenem, Cotrimoxazole
Pseudomonas Amikacin, Ciprofloxacin, Cefuroxime, Ceftriaxone, 1/1
maltophilia Piperacillin-Tazobactam Imipenem
Enterobacter Imipenem Netilmicin, Amikacin, 1/1
cloacae Ceftriaxone. Ciprofloxacin
Aeromonas Netilmicin, Ceftriaxone, Ampicillin, Cefuroxime 1/1
hydrophilia Piperacillin-Tazobactam,
Imipenem
Table 7. Organisms isolated and sensitivity pattern from pathogens found in Chong Hua Hospital in
patients diagnosed with neonatal sepsis.
Organism Sensitive Resistant No. of Isolates/No.
Isolated tested
E. coli Gentamicin, Netilmicin, Amikacin, Cotrimoxazole 1/1
Cefuroxime, Ceftazidime,
Cefepime, Ciprofloxacin,
Piperacillin-Tazobactam,
Imipenem,
Staphylococcus Vancomycin, Clindamycin Cefazolin, Cefuroxime, 1/1
epidermidis Ciprofloxacin, Oxacillin,
Piperacillin-Tazobactam,
Erythromycin
Table 8. Organisms isolated and sensitivity pattern from pathogens found in Davao Doctors Hospital.
Organism Isolated Sensitive Resistant Variable No. of Isolates/No.
tested
Enterobacter cloacae Ciprofloxacin, Meropenem, Ampicillin, Gentamicin, Cefepime (66% sens), 3/3
Imipenem Amikacin, Cefuroxime, Chloramphenicol (66%
Ceftazidime sens), Cotrimoxazole
(66% sens)
Pseudomonas spp. Ceftazidime, Cefepime, Gentamicin, Amikacin, Chloramphenicol (50% 2/2
Ciprofloxacin, Piperacillin- Ampicillin, Cefuroxime, sens)
Tazobactam, Meropenem,
Imipenem, Cotrimoxazole,
Klebsiella ozanae Ceftazidime, Ciprofloxacin, Gentamicin, Amikacin, 1/1
Chloramphenicol, Ampicillin, Cefuroxime,
Meropenem, Imipenem Cefepime, Piperacillin,
Tazobactam, Cotrimoxazole
Escherichia coli Gentamicin, Amikacin, None 1/1
Ampicillin, Cefuroxime,
Ceftazidime, Cefepime,
Ciprofloxacin, Piperacillin,
Tazobactam, Imipenem,
Meropenem
Table 9. Organisms isolated and sensitivity pattern from pathogens found in Philippine Children’s
Medical Center, Quezon City.
Organism Sensitive Resistant No. of
Isolated Isolates/ No.
tested
Salmonella Gentamicin, Amikacin, Cefuroxime, Ceftriaxone, Cotrimoxazole 1/1
spp. Cefepime, Chloramphenicol, Ciprofloxacin,
Piperacillin-Tazobactam, Imipenem
life) with only 39% developed sepsis after dominant bacteria found (Pseudomonas spp,
72hrs. Early onset sepsis was more prevalent in Burkholderia spp., Klebsiella spp.), which
SLU, PCMC and PGH, while for DDH and CHH, comprised 94% of the bacteria isolated. Two
late onset infections predominated. isolates of Methicillin-resistant Staphylococcus
The most common site of infection was the aureus and two isolates of Enterococcus were
lungs, presenting as pneumonia 57%, the only gram-positive bacteria isolated. These
followed by sepsis without an obvious site of were from neonates admitted at PGH and CHH
infection (35%). Other sites were much less only.
frequent which included urinary tract infection, The study centers also had diverse gram
necrotizing enterocolitis, meningitis, cellulitis negative organisms which predominated in
and infective endocarditis. their area. Pseudomonas putida was the most
common isolate in PGH. The sole isolate of
Pathogens Isolated PCMC grew Salmonella spp.
In 50% of patients, an organism was
identified, but the isolation rates differed Antibiotic Resistance
among the centers. The PGH had the highest Resistance patterns varied among the
yield (76%), while PCMC had the lowest with different urban study centers. The
only one culture positive patient among 67 Pseudomonas and Burkholderia isolates from
patients. Gram negative bacteria were the PGH were fully sensitive to Ceftazidime. All
Klebsiella isolates from SLU were resistant to transferred from other parts of the country and
third generation cephalosporins. In contrast, most deliveries at this hospital were high risk
Klebsiella isolates from PGH and Davao were pregnancies. Consistent with previous studies,
sensitive to third generation cephalosporins but there were more male patients who were
resistant to piperacillin-tazobactam. Tables 7 to Across all centers, Gram-negative bacteria were
11 show the details of antibiotic resistance for the dominant pathogens, although the species
each study site. were varied. Pseudomonas spp. was the most
Antibiotic Usage common bacteria isolated followed by
Antibiotic usage differed slightly from in Burkholderia cepacia. This is consistent with
each institution. In Baguio, Cebu, Davao and reports from other countries in Asia and the
PCMC, first line drugs are a combination of Middle East. A study from Kashir, Iran showed
Ampicillin (Ampicillin-sulbactam occasionally 72.1% of the bacteria isolated from infants with
for Davao) and an aminoglycoside (amikacin or neonatal sepsis were Gram negative with
gentamicin). Unfortunately, in approximately Pseudomonas and Klebsiella as the most
half of these patients, their physicians shifted common organisms.10 In a more recent study
these antibiotics either due to perceived poor from Shiraz, Iran, Early onset sepsis (EOS) was
responses of the patients or receipt of the caused by E. coli, followed by Klebsiella which
culture and sensitivity results changing to a was different from Late onset sepsis (LOS)
drug which is sensitive. which was due to Coagulase negative
Outcome Staphylococcus followed by Enterococcus11.
The overall mortality rate was 14% with the In the Database of the Aga Khan University
highest mortality at PGH (19%) and the lowest Hospital of Pakistan, gram negative organisms
at PCMC (7.5%). The mortality rates of neonatal accounted for 60% (173 of 292) of all their
sepsis for the other centers were as follows: isolates in their newborn unit; with Klebsiella as
DDH-17%, CHH-17% and SLU-9.5%. the most common one found. 12 In the NICU of
DISCUSSION MKCG Hospital in Orissa, India 88.4 % (38 of 48)
The large number of patients collected in a were gram-negative bacilli with Klebsiella and
six-month period reflects the significance of E. coli being the most common ones.13 In
this disease. The number of patients per center another study from India, gram negative
reflects the general economic status of the organisms also predominated (58.5%).14 In a
citizens with large volumes in the public more recent from Pudcherry, India, the most
hospitals (PGH), and much fewer admissions in common etiology of EOS was Klebsiella
the private hospitals (St. Louis Hospital, and pneumoniae.15
Chong Hua Hospital). The PGH may have an
unusually large number because it is a national
referral center wherein patients may have been
diagnosed with sepsis. Early onset sepsis was
also higher in number than late onset sepsis
despite narrowing the definition of the latter to
the first three days of life.
Prior to the antibiotic era, the mortality from
septicemia was more than 90%. In the present
times, mortality remains high, between 20%-
40%. The mortality rate in this study was 14%
which may be due to these hospital having
adequate supportive facilities since they are all
tertiary hospitals.
Table 10. Top five Organisms isolated and sensitivity pattern from pathogens found in Philippine
General Hospital.
Organism Sensitive Resistant Variable No. of
Isolated Isolates/ No.
tested
Pseudomonas Ceftazidime Gentamicin, Amikacin, Cefuroxime (43% S), Cefotaxime (50% S), 55/1-25
putida Ampicillin, Cefepime (85% S), Ciprofloxacin (35% S), depending on
Piperacliin-Tazobactam (82% S), Meropenem antibiotic
(62% S), Imipenem (23% S),Cotrimoxazole
(88% S)
Burkholderia Cefotaxime, Cefepime, Amikacin, Imipenem Ampicillin (14% S), Ceftazidime (90% S) 16/3-11
mallei Piperacillin-Tazobactam, Ceftriaxone (75% S), Ciprofloxacin (38% S), depending on
Cotrimoxazole Meropenem (29% S) antibiotic
Burkholderia Cefuroxime, Ceftriaxone, Gentamicin, Amikacin, Meropenem (75% S), Imipenem (33% S) 8/1-5
cepacia Ceftazidime, Piperacillin- Ciprofloxacin depending on
Tazobactam, antibiotic
Cotrimoxazole
Acinetobacter Gentamicin, Amikacin, Ampicillin (20% S), Cefuroxime 50% S), 7/1-5
baumanii Ciprofloxacin, Ceftazidime (25% S), Ceftriaxone (50% S), depending on
Imipenem, Cefepime (25% S), Piperacillin-Tazobactam antibiotic
Cotrimoxazole (40% S), Meropenem (50% S)
Burkholderia Ceftazidime, Piperacillin- Gentamicin, Amikacin, Cefepime (66% S) 6/1-5
pseudomallei Tazobactam, Meropenem Netilmicin, depending on
Ceftriaxone, antibiotic
Table 13. First line drugs used and success rates in patients with neonatal sepsis according to hospital.
Drug SLU CHH DDH PCMC PGH All hospitals
No. Succ Succ No. Succ No. Succ No. Succ No. Succ
(%) (%) (%) (%) (%) (%)
Ampicillin 4 1 (25) 15 6 (40) 7 2 (29) 62 33(53) 31 15 (48) 119 57 (48)
Ampicillin- 0 0 9 3(33) 0 0 9 3(33)
Sulbactam
Gentamicin 19 6 (32) 0 5 2 (40) 62 3(53) 0 86 41 (48)
Amikacin 0 15 7 (47) 15 6 (40) 1 0 158 28(26) 189 82(43)
Cefotaxime 1 0 2 1 (50) 0 0 2 2(100) 0 5 5(100)
Piper-Tazo 0 0 2 1(50) 1 0 106 84(76) 106 29(27)
Meropenem 1 0 (0) 0 0 0 3 3(100) 1 0 5 3 (60)
Ceftazidime 0 1 1(100) 5 1 (20) 0 6 6(100) 11 5(45)
Cefepime 1 1 (100) 0 2 0 0 3 1 (33)
Oxacillin 0 1 0 (0) 0 0 4 3(75)
Metronidazole 0 1 1 (100) 1 1 (100) 0 14 11(79) 13 4(31)
Penicillin 13 4 (31) 0 0 0 1 1(100) 15 5 (36)
dominant organism.16 In the Neonatal Network
Traditionally, Group B streptococci (GBS), E. of Burgundy France, from preterm infants (<35
coli and Listeria monocytogenes are considered weeks) with early onset sepsis, gram negative
to be most common in the Western countries, bacilli was the most frequent organism isolated.
but this phenomenon too is changing in certain But for term and near-term infants, GBS
groups of patients. In the latest data from the followed by E. coli was most frequent.17
National Institute of Child Health (NICH) and Gram-positive organisms found in other
human Development Neonatal Research studies include GBS, S. epidermidis, S. aureus,
Network VLBW registry, gram-negative Enterococcus and S. pneumoniae. In our study,
organisms already predominate for early onset only S. epidermidis and Enterococcus were
sepsis (53%) with E. coli being the most found.
16. NICH Stoll BJ, Hansen NI, et al. Very low birth weight
preterms with early onset neonatal sepsis: the
predominance of gram negative infections continues in
the NICHD Neonatal Research Network, 2002-2003.
Pediatr Infect Dis J 2005; 24(7): 635-9