VISAYAS GEOTHERMAL POWER COMPANY v. COMMISSION ON INTERNAL REVENUE

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VISAYAS GEOTHERMAL POWER COMPANY v.

COMMISION ON INTERNAL REVENUE


G.R. No. 205279, April 26, 2017.

FACTS:

Petitioner Visayas Geothermal Power Company (VGPC) is a special limited


partnership duly organized and existing under Philippine Laws with its principal office at
Milagro, Ormoc City, Leyte. It is principally engaged in the business of power generation
through geothermal energy and the sale of generated power to the Philippine National
Oil Company (PNOC), pursuant to the Energy Conversion Agreement. On December 6,
2006, it filed with the BIR its Quarterly VAT Returns for four (4) quarters of taxable year
2005 on April 25, 2005, July 25, 2005, October 25, 2006, and January 20, 2006,
respectively. Pursuant to Republic Act (R.A.) No. 9136 which treated sales of generated
power subject to VAT to a zero percent (0%) rate starting June 26, 2001, it filed its
administrative claim for tax refund with the BIR. On January3, 2007, while its
administrative claim was pending, VGPC filed its judicial claim though a Petition for
Review with the Court of Tax Appeals (CTA). On April 17, 2009, the CTA Second
Division partially granted the petition based on the amount that was substantiated by
evidence. The CTA Second Division denied the separate motions for partial
reconsideration filed by VGPC and the CIR. Thus, both VGPC and the CIR appealed to
the CTA En Banc.

CTA En Banc reversed and set aside the decision and resolution of the CTA
Second Division, and dismissed the original petition for review for having been filed
prematurely, citing the Aichi case. CTA En Banc explained that although VGPC
seasonably filed its administrative claim within the two-year prescriptive period, its
judicial claim filed with the CTA Second Division was prematurely filed under Section
112 (D) of the National Internal Revenue Code (NIRC). The Motion for Reconsideration
of VGPC was denied.

ISSUE:

Whether or not the judicial claim of VGPC was prematurely filed

RULING:

No. The CTA can only acquire jurisdiction over a case after the CIR has rendered
its decision, or after the lapse of the period for the CIR to act, in which case such
inaction is considered a denial. A petition filed prior to the lapse of the 120-day period
prescribed under said Section would be premature for violating the doctrine on the
exhaustion of administrative remedies. This was a decision made in Aichi and upheld in
San Roque case. However, the petitioner’s claim was an exception to the mandatory
and jurisdictional nature of the 120+30 day period because it was filed between
issuance of BIR Ruling No. DA-489-03 on December 10, 2003 and promulgation of
Aichi in October 6, 2010.
The Court in San Roque noted that BIR Ruling No. DA-489-03, dated December
10, 2003, expressly stated that the "taxpayer-claimant need not wait for the lapse of the
120-day period before it could seek judicial relief with the CTA by way of Petition for
Review." Aichi shall not be applied prospectively. The Atlas doctrine, which held that
claims for refund or credit of input VAT must comply with the two-year prescriptive
period under Section 229, should be effective only from its promulgation on June 8,
2007 until its abandonment on September 12, 2008 in Mirant case. Petition is granted
and tax credit certificate will be issued based on the amount with substantive evidence.

STATUTORY PRINCIPLE APPLIED:

Following the well-settled verba legis doctrine, the law should be applied exactly


as worded since it is clear, plain, and unequivocal. Stare decisis is also applied in
standing by the precedent wherein principles applied in previous cases is adhered in
cases where facts are substantially the same.

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