Introducing Alkene Moieties Via Iterative Carbenoids
Introducing Alkene Moieties Via Iterative Carbenoids
Introducing Alkene Moieties Via Iterative Carbenoids
aAll reactions were carried out on 0.2 mmol. For primary alkyl substrates, chloro(trimethylsilyl)-methyllithium (Si-1, 1.3 equiv),
lithiated S-1 (1.3 equiv), and ZnCl2 (2.0 equiv) were used. For secondary alkyl substrates, chloro(dimethylphenylsilyl)-methyllithium
(Si-2, 1.3 equiv), lithiated S-2 (1.2 equiv), and HgCl2 (1.2 equiv) were used. For experimental details, see the Supporting Information.
Isolated yields are the overall yields of all operations starting from RBpin or RBneop. bThe number in parenthesis is the NMR yield.
The lower isolated yield is due to volatility of the products.
alkenyl boronate products without isolation of any reaction in- products (3v and 3x) with retention of the relative stereochem-
termediates. Note that the addition of LiBr was not necessary istry.
during the insertion of alkoxy carbenoid as stoichiometric LiCl Aryl boronates are also suitable substrates for vinylene ho-
was generated after the silyl carbenoid insertion. The reaction mologation (Table 3). The use of HgCl2 as the Lewis acid gave
shows a broad scope and various alkyl boronates underwent the high diastereoselectivity during the alkoxy-carbenoid insertion
vinylene homologation with good to excellent E/Z selectivity (see Supporting Information, Table S4).15 The reaction appears
(up to 19:1).14 FGs, such as aryl fluoride (2b, 2i), aryl chloride to be quite general. First, aryl groups with various substitution
(2c, 2j, 2k), aryl bromide (2d) and thioether (2h), were tolerated. patterns, such as those containing para, ortho, or meta substitu-
When secondary alkyl boronates were used as substrates, the ents, all afforded the desired products. The electronic properties
desired E alkene products were only observed in low yield un- of the arene do not seem to have a significant effect on either
der the standard conditions likely due to increased sterics. We the reactivity or the E/Z selectivity. Unlike the cases of alkyl
hypothesized that the reactivity could be restored by reducing boronates, typically more than 20:1 E/Z selectivity were
the steric congestion around the boron. Indeed, using the corre- achieved for all the products. In addition, FGs, including trifluo-
sponding neopentyl glycol-derived boronates (Bneop), the re- romethyl ether (5b), thioether (5c), silyl ether (5d), iodide (5e),
activity was greatly improved. Meanwhile, employment of a silane (5f) and alkyl chloride (5h), were compatible. Note that
bulkier dimethylphenylsilyl-derived carbenoid afforded better alkene (5i) and alkyne (5j) moieties were also tolerated. More-
diastereoselectivity, and the use of HgCl2 further improved the over, heteroarene-derived boronates are competent substrates
E/Z selectivity to some extent (see Supporting Information, Ta- (5u-5y). This method can be used to derivatize an estrone-based
ble S3). To ease the isolation process, the alkenyl Bneop prod- substrate (5z). Finally, the reaction is scalable, and on 5 mmol
ucts were directly converted to the corresponding alkenyl io- scale alkenyl boronate product 5a was isolated in 50% overall
dides. Cycloalkyl boronates of different ring sizes all showed yield.
moderate to good efficiency and good E/Z selectivity (3p-3s).
Bridged-ring scaffolds (3t and 3u) were compatible, and the
acyclic secondary alkyl boronate (3w) also worked reasonably
well. Moreover, the substrates derived from more complex nat-
ural products could deliver the desired vinylene homologation
Table 3. Substrate Scope for Aryl Boronatesa
aAll
reactions were run on 0.2 mmol, unless noted otherwise. Isolated yields are the overall yields of all operations starting from
RBpin. bIsolated yield on 5.0 mmol scale. cThe corresponding ethylene glycol ketal was used as the substrate; H2SO4 (2.0 equiv) was
added in the elimination step to reveal the ketone moiety through deprotection.
The reaction mechanism was explored through a combined plane but opposite to the direction of the carbenoid addition,
effort between experiment and computation. The α-methoxy, β- which is analogous to both the Felkin−Anh and Cieplak models
silyl boronate intermediate (anti-7a) can be successfully iso- in carbonyl addition reactions.17 The calculated transition states
lated and characterized spectroscopically (Scheme 2). Its fur- corroborate this hypothesis. Our computation indicates that
ther treatment with acids delivered the E product 5a exclu- boronate 12a is the kinetically favored product, which is formed
sively, which confirms its intermediacy in the Peterson-type through transition state TS1a. In contrast, transition state TS1b
elimination step. To unambiguously determine the relative ste- leading to the other diastereomer 12b is 1.3 kcal/mol less stable
reochemistry, further methylene homologation of the α-meth- than TS1a, due to unfavorable gauche-like interactions between
oxy, β-silyl boronate intermediate (anti-7b) followed by oxida- the arylthiolate LG and the α-methyl group on boronate 10.18
tion and p-nosyl protection afforded sulfinate 8, which can be This stereochemical model is also consistent with the higher di-
characterized by X-ray crystallography. The X-ray structure of astereoselectivity observed with bulkier arylthiolates (e.g., S-1,
compound 8 clearly shows an anti-relationship between the si- Table 1).
lyl and the methoxy groups.
Next, we considered the ZnCl2-promoted 1,2-migration from
Density function theory (DFT) calculations were carried out boronate 12a. Conformational sampling using CREST and DFT
to investigate the diastereoselectivity of the carbenoid insertion calculations (see Supporting Information for details) suggests
step and the Lewis acid effect. One intriguing question is that ZnCl2 prefers to bind to the arylthiolate sulfur and one of
whether the use of different Lewis acids (ZnCl2 and HgCl2) the boronate oxygen atoms to form 13a (Figure 2). From 13a,
would alter the mechanism of the 1,2-boronate migration from the SN2-type pathway, where the 1,2-migration and arylthiolate
a concerted SN2-type pathway to a non-stereospecific stepwise LG dissociation occur via a concerted transition state TS2 was
SN1-type pathway. First, the transition states of the addition of found to be the most favorable with an activation free energy
alkoxy-substituted carbanion 11 to 𝛼-silylalkyl boronate 10 was (ΔG‡) of 15.6 kcal/mol. By contrast, the SN1-type pathway that
computed (Figure 1).16 We hypothesize that the bulkiest silyl involves a stepwise LG dissociation to form 14 followed by 1,2-
group should orientate nearly perpendicularly to the boronate migration via either TS3a or TS3b is less favorable because the
Scheme 2. Intermediate Isolation and Relative Stereochemistry
Figure 1. Computed energy profile of the diastereoselective carbenoid addition to 𝛼-silylalkyl boronate 10. All the boro-
nates used were pinacol boronic esters. DFT calculations were performed at the M06/6-311+G(d,p)/SMD (THF)//B3LYP-
D3(BJ)/6-31G(d)/SMD(THF) level of theory. Conformational sampling was performed with CREST at the GFN-xTB2 level of
theory.
Figure 2. Computed energy profiles of the competing SN1- and SN2-type pathways in the ZnCl2-mediated 1,2-migration of boronate
complex 13a. All the boronates used were pinacol boronic esters. DFT calculations were performed at the M06/6-
311+G(d,p)/SDD(Zn)/SMD(THF)//B3LYP-D3(BJ)/6-31G(d)/SDD(Zn)/SMD(THF) level of theory. Conformational sampling was
performed with CREST at the GFN-xTB2 level of theory.
Scheme 3. ZnCl2/HgCl2-Mediated SN1-Type 1,2-Migra- synthesized via a sequence of one-pot double methylene homol-
tion Pathwaysa ogation, vinylene homologation, and Suzuki termination with
vinyl bromide 18 (route A).22 This three-step synthesis only
needs one chromatography with 32% overall yield and 12:1 E/Z
selectivity. The piperdardine analog23 was prepared in 67%
overall yield in a similar manner via route B, involving mono
methylene homologation, vinylene homologation, and Suzuki
termination with vinyl bromide 17. To access the tri-ene natural
product retrofractamide A,24 the synthesis started with vinylene
homologation, next double methylene insertion, and then an-
other vinylene homologation before termination by the Suzuki
reaction (route C). Compared to the prior approaches to access
these compounds, this iterative synthesis strategy uses fewer
steps, gives higher overall yield, minimizes purification of re-
action intermediates, and more importantly provides program-
mability to the synthetic design.
aAll the boronates used were pinacol boronic esters. DFT calcu- Finally, preliminary success has been obtained with the Z-
lations were performed at the M06/6- selective vinylene homologation of aryl boronates (Scheme 5).
311+G(d,p)/SDD(Zn,Hg)/SMD(THF)//B3LYP-D3(BJ)/6- Based on the mechanistic understanding, it is clear that for-
31G(d)/SDD(Zn,Hg)/SMD(THF) level of theory. Conforma- mation of the ate complex (e.g., 9a) is diastereoselective and
tional sampling was performed with CREST at the GFN-xTB2 soft Lewis acids, such as zinc and mercuric salts, promote ar-
level of theory. ylthiolates as the LG during the 1,2-metallate migration. We
therefore postulated that, replacing soft Lewis acids with an ox-
LG dissociation step is endergonic by 15.5 kcal/mol. Because yphilic (i.e., “hard”) Lewis acid, the syn-oriented α-thiophe-
the stereospecific SN2-type 1,2-migration (TS2) leads to com- noxy, β-silyl boronate syn-20a could be selectively obtained by
plete stereoinversion at the alkoxy-substituted carbon center, having the alkoxy group as the LG instead (Scheme 5A). To our
this process converts 13a to the anti-diastereomer of the α- delight, the LG selectivity in the 1,2-migration step can be al-
methoxy, β-silyl boronate 15. Upon stereospecific Peterson tered simply by changing the Lewis acids to AlCl3 or CeCl3.
elimination, an E-alkene would be selectively formed, which is The α-thiophenoxy, β-silyl boronate intermediate 20a was ob-
consistent with the experimentally observed stereoselectivity tained in high diastereoselectivity (>15:1). Notably, intermedi-
when ZnCl2 is used as the Lewis acid. Considering that mercury ate 20a exhibited increased stability compared to α-methoxy
has stronger thiolate binding affinity than zinc, 19 we surmised boronate 7a, allowing for chromatography purification and
that the non-stereospecific SN1-type 1,2-migration pathway can spectroscopic characterization. To promote efficient anti-elim-
be more favorable when HgCl2 is used as the Lewis acid. In- ination, the arylthiolate (S-4) containing a para chloro group
deed, the HgCl2-promoted arylthiolate dissociation (from 16a) was found to be a better LG (Scheme 5B). Treatment of inter-
is only endergonic by 3.3 kcal/mol, which is 12.2 kcal/mol mediates 20 with 1.2 equivalent of TBAF and 1.5 equivalent of
lower in energy than the analogous ZnCl2-mediated LG disso- methyl vinyl sulfone (to sequestrate the arylthiolate LG that can
ciation process (Scheme 3). Because intermediate 14 undergoes potentially epimerize 20 through 1,2-metallate migration) af-
facile 1,2-migration via TS3a and TS3b (ΔG‡ = 1.6 and 2.5 forded the desired Z-alkenylboronates 21a-f in good yields and
kcal/mol with respect to 14, respectively), the stepwise SN1- synthetically useful diastereoselectivity (for detailed optimiza-
type pathways are much more favorable when the more thioph- tions, see Supporting Information, Table S5).25 Efforts on im-
ilic HgCl2 Lewis acid is used, leading to a diminished diastere- proving the Z selectivity and expanding to alkyl boronates are
oselectivity of the homologation product (see entry 3, Table 1). ongoing.
Next, the synthetic utility of the vinylene homologation
method has been explored. First, due to the versatile reactivity CONCLUSIONS
of alkenylboronates, the homologation product can undergo
various facile transformations to access synthetically valuable In summary, we have developed the stereoselective vinylene
structural motifs (for details, see Supporting Information, homologation of organoboronates enabled by sequential dia-
Scheme S1). Additionally, this method can be used to generate stereoselective carbenoid insertion and the Peterson-type elim-
a masked alkene moiety, which can survive under hydrogena- ination. This strategy provides rapid access to various alkenyl
tion conditions (Scheme 4A). Moreover, besides the reactions boronates from readily available alkyl or aryl boronates, which
with alkyl boronates, mercury salts can also be avoided for the paves the way for programmable iterative synthesis of complex
homologation with aryl boronates when using 4.0 equivalent of alkene-containing molecules. The mechanistic insights gained
ZnCl2 instead (Scheme 4B).20 The synthetic potential of this on the diastereoselective carbenoid addition, the Lewis acid-de-
method was further demonstrated in the streamlined syntheses pended 1,2-migration, and divergent reactivity of lithiated
of piperamide-family natural products (Scheme 4C), which alkoxy aryl sulfanes could be valuable to understand the stere-
have been known to exhibit insecticidal, anti-cancer, and other ochemistry outcomes of similar reactions and have broad impli-
biological activities.(21) We envisioned that, through merging cations beyond this work.
the vinylene homologation and methylene homologation, the
polyene backbone of piperamides could be efficiently accessed
by a unified iterative approach. Starting from the common sub-
strate, aryl boronic ester 4r, piperdardine was efficiently
Scheme 4. Synthetic Applications
Scheme 5. Z-Vinylene Homologation of Aryl Boronatesa ACKNOWLEDGMENT
University of Chicago, ACS PRF (65249-ND1 to G.D.) and
NIGMS (R35GM128779 to P.L.) are acknowledged for research
support. We thank Dr. Qiqiang Xie (University of Chicago) for
checking the experimental procedure. Computational studies were
performed at the Center for Research Computing at the University
of Pittsburgh.
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10