Community Ecology of Ectomycorrhizal Fungi An Advancing Interdisciplinary Field
Community Ecology of Ectomycorrhizal Fungi An Advancing Interdisciplinary Field
Community Ecology of Ectomycorrhizal Fungi An Advancing Interdisciplinary Field
Review
Research review
Blackwell Science Ltd
Summary
Key words: ectomycorrhizal A long-term goal of community ecology is to identify spatial and temporal factors
community ecology, mycorrhizas, plant that underlie observed community structures. Ultimately, ecologists seek to relate
ecology, ecosystem processes. community patterns to ecosystem processes and functions. Since the mid 1990s,
ectomycorrhizal (ECM) research has been equipped with tools to identify and fully
quantify the taxonomic diversity in below-ground ECM fungal communities in detail
and address such questions. Many of the most important functions of terrestrial ecosystems,
as well as interactions, between plants take place below ground and mycorrhizal fungi
are among the key players in soil ecology. Here the rapidly increasing knowledge of
ECM fungal community ecology is reviewed and the prospects discussed for elucidating
processes that structure ECM fungal communities and the way in which such knowledge
might be integrated with, and advance, the understanding of plant ecology and
ecosystem processes.
Table 1 A compilation of the three most abundant or frequent ectomycorrhizal (ECM fungal taxa, as recorded from mycorrhizas, in 49 ECM
fungal community studies published so far. Only studies where the taxonomic identity of at least one of the three most abundant taxa was
certified are included. Figures indicate at how many studies certain taxa dominated. The data from Canada includes four assessments of ECM
communities on seedlings. Besides 21 papers referred to in the present review paper, 28 additional studies are included
Coniferous forest
Boreal Canada 15 10 7 3 4 4 1 9
Sweden 12 6 12 3 2 2 1 1
Temperate Switzerland 3 1 3 3 1
& Germany
USA 15 4 7 8 7
Deciduous forests
USA 1 1
Germany 1 1
Netherlands 1 1
Rainforest
Indonesia 1 1
In total: 49 22 22 17 14 14 3 10 1
Sequence data in the ML5/ML6 region of the mitochondrial ground mycorrhizal networks. Thelephoraceae, Russulaceae and,
LrDNA representing all major ECM basidiomycete genera is at least in post fire settings, also suilloid fungi repeatedly emerge
established (Bruns et al., 1998). Thus, any single mycorrhiza as the most frequent or abundant mycorrhizas in forests of
can potentially be identified to species either by ITS-RFLP western USA, whereas Corticeaceous fungi and Cenococcum
comparison with reference material or by sequence comparison geophilum, followed by Russulaceae and Thelephoraceae appear
narrowed down to smaller subsets of putative species affinity as the most common in boreal forests (Table 1).
that ultimately, with supplementation of appropriate references, The general rule is that a few fungal ECM taxa account for the
will be identified. most, (> 50%), of the mycorrhizal abundance and are widely
Slightly more than 50 such ECM community studies have spread whereas the majority of species are only rarely encoun-
been published in the period between 1996 and late 2000, few tered (Gehring et al., 1998; Jonsson et al., 1999a,b; Peter et al.,
before (cf. Horton & Bruns, 2001; cf. Table 1). Two thirds of 2000; Stendell et al., 1999; Grogan et al., 2000). In two
these have been based on morphotyping and one third on stands of Douglas-fir, 69 morphotypes were recognized from
molecular methods, sometimes with morphotyping-based 17 500 assessed mycorrhizas; most types were rare, 19 types
stratification as a powerful approach (Jonsson et al., 1999a). colonized > 1% of the mycorrhizas and 9 types colonized
together 67% (Goodman & Trofymow, 1998a). This pattern
of dominance of a few species and rarity of most others is a com-
Characteristics of ECM communities
mon community pattern of any taxonomic group of organisms.
Studies from North America and Europe unanimously confirm Major determinants of the composition of ECM fungal
that fungi that do not form obvious fruiting structures form the community are host plant composition ( Molina et al., 1992)
major mycorrhizal abundance. Fruiting species merely constitute and edaphic factors (Gehring et al., 1998; Kernaghan & Harper,
20–30% of the mycorrhizas (e.g. Gardes & Bruns, 1996; Jonsson 2001). Within local forests, the spatial variation of ECM fungi
et al., 1999a; Fig. 1). Apparently, carbon budget or resource alloca- is very high and most species show aggregated distributions
tion to production of sporocarps vs mycorrhizas and mycelial (Gardes & Bruns, 1996; Kranabetter & Wylie, 1998; Bidartondo
growth vary among species, as discussed in Gardes & Bruns et al., 2000). A study of pinyon trees showed one or a few ECM
(1996) seminal community paper. Typically, certain species fungal taxa to dominate single trees, and the dominant fungi
that commonly form mycorrhizas are poorly or nonrepresented varied between trees (Gehring et al., 1998). Spatial variation
in the above-ground fruiting record, and commonly fruiting spe- was concluded to have a larger effect on ECM fungal species
cies may conversely have only a limited representation in below- composition, than that caused by low intensity wildfire, the
major natural disturbance in Swedish boreal forests (Jonsson and the mycorrhizas, and the temperature and humidity of
et al., 1999a). One exception is reported in a study of 1000- the soil. This certainly affects the patterns of fruiting. However,
yr-old bristlecone pine stands at high elevation in California; a detailed molecular study of mycorrhizas in a Swiss Norway
here one ECM Pyronemataceae sp. was consistently present as spruce forest conducted over three years showed a striking
inoculum in soil at all forest sites (Bidartondo et al., 2001). similarity in abundance of the 10 most abundant taxa (Peter
Commonly, small volumes of soil contain several ECM species, et al., 2001).
for example single four year old seedlings were colonized by Processes in ECM fungal populations underlie ECM fungal
up to 11 ECM fungi (Kranabetter & Wylie, 1998). Certain community patterns and thus, a knowledge of the ability of
taxa also appear to grow better in either the organic or mineral individual ECM fungal species to bridge distances in time and
layer (cf. Goodman & Trofymow, 1998). space is central to the understanding of ECM community
A significant step forward in understanding ECM fungal structure. However, little is known about the relative impor-
community structure is to establish studies that allow estimation tance of mycelial spread and longevity vs novel colonization
of the relative importance of different mechanisms that create from spores for any ECM fungal species. From the nearly 20
this diversity, and take into consideration spatial and temporal studies of ECM fungal population structures conducted so far
scales. Hypotheses to explore can be placed in two categories: (cf Redecker et al., 2001), it is apparent that genets in some
those based on niche differentiation between coexisting species; species are numerous, short-lived (1–2 yr) and small (< few
and, paradoxically, those based on similarities in competitive m, i.e. Hebeloma cylindrosporum, Laccaria amethystina, Amanita
ability, that is nonequilibrium models. An example of the franchetii, Russula cremoricolor). Other species may have few
former is the intermediate disturbance hypothesis stating that and due to persistence (decades to centuries) and mycelial
a disturbance leads to a predictable sequence of species repla- spread, relatively large genets (20–40 m in diameter, i.e.
cing each other. An intermediate range of disturbance would Suillus spp. and Cortinarius. Small genets may suggest colon-
allow a range of species traits, early to late successional species, ization from recent meiospores, whereas fewer, larger genets
to coexist and lead to a high species richness. The latter assumes indicate old mycelial structures, that have grown from a point
elements of stochasticity which enhance coexistence: so called source over decades. The latter are often found in old forests
lottery models state that due to poor dispersal ability, low (Fig. 1). Some studies suggest mycelial colonization as the
local abundance and chance events, species may be absent in primary avenue of ECM fungal colonization in mature un-
a neighbourhood and their abundance recruitment may thus disturbed forests, i.e. that clonal traits are of higher fitness
be limited. Therefore the best competitor that happens to than sexual traits under undisturbed conditions (e.g. Jonsson
colonize a particular local site may well be inferior on a larger et al., 1999b; Kranabetter et al., 1999). Resistant ECM fungal
scale. Potentially, this can lead to unlimited species richness. propagules also persist, probably in the mineral soil, after major
disturbances such as stand replacing wildfires (Baar et al., 1999).
Exceptions do occur, for example L. amethystina appear to
Temporal dynamics of ECM communities
be short-lived in old beech forests (Gherbi et al., 1999).
Successional changes in primary vegetation successions, and Demographic patterns in ECM fungi, or any soil dwelling
thus of primary ECM fungal colonization, are described from fungus, have still not been explored.
glacial retreats and farmlands. Such questions have been studied There is a need to launch studies of regional scale dynamics
in the course of natural secondary forest succession in a few of ECM fungal populations, and communities, to elucidate
cases. It must be remembered that forest management procedures, important population processes. There is also a need to deter-
such as clearcutting, impose novel selection pressure upon ECM mine which models are most applicable for different ECM fungi:
fungi. Marked changes in ECM community composition occur theories of remnant population dynamics with discontinuous,
after intense, stand replacing fire that totally consumes the nonequalibrium conditions and a pervasive impact of ‘accidents
organic layer, a natural occurrence in certain forest ecosystems of history’ or, on the other hand, meta-population models
( Visser, 1995; Grogan et al., 2000). However, in low intensity with continuous, equilibrium conditions and without historic
fires, where part of the organic layer remains unburnt and a dimensions (cf. Eriksson, 1996).
large proportion of trees survive the fire, the legacy of ECM
fungi appears large (Jonsson et al., 1999a). Short-term variation
in abundance of certain taxa of mycorrhizas may occur, but as
Interactions with plant communities
yet has been poorly investigated, as weather conditions affect Most ECM fungal species typically have broad, but differing,
photosynthesis and thereby allocation of assimilates to the roots, plant host ranges. They may form mycorrhizas with any ECM
Fig. 1 (opposite) Late successional Scots pine stands, in northern Sweden, where both ectomycorrhizal fungal community structure from
sporocarps and mycorrhizas, and fungal population structure of Suillus variegatus have been analysed. The last major disturbance was a forest
fire in 1647. The relative proportion of mass in sporocarps (open red bars, 34 taxa) and of mycorrhizal abundance (closed blue bars, 24 taxa,
distinguished by ITS-RFLP) is shown (Jonsson et al., 1999b). At the same site the spatial distribution Suillus variegatus genets was monitored
from sporocarps analysed by somatic incompatibility reactions (from Dahlberg (1997), with permission).
the abilities of these ECM fungal communities differ for fungi in an old Norway spruce forest in south Sweden. Canadian Journal
various functions, such as carbon cost, rate of nutrient-cycling of Botany 8: 1323–1335.
Danielson RM. 1984. Ectomycorrhizal associations in jack pine stands in
or response to perturbations. northeastern Alberta. Canadian Journal of Botany 62: 932 – 939.
One promising approach is to explore ECM fungal community Eriksson O. 1996. Regional dynamics of plants: a review of evidence for
functioning under simulated forest conditions using micro- remnant, source-sink and metapopulations. OIKOS 77: 248 – 258.
cosm systems (Tammi et al., 2001). In these systems, intact Gardes M, Bruns TD. 1993. ITS primers with enhanced specificity for
mycorrhizal root systems comprising individual species, for basidiomycetes – application to identification of mycorhizae and rusts.
Molecular Ecology 2: 113–118.
example abundant taxa likely to be functionally important, or Gardes M, Bruns TD. 1996. Community structure of ectomycorrizal fungi
natural communities, can be manipulated and analysed to in a Pinus muricala forest: above- and below-ground views. Canadian
determine carbon and nitrogen relations and host root-fungal Journal of Botany 74: 1572–1583.
metabolic activities that contribute to plant growth or plant Gehring CA, Theimer TC, Whitham TG, Keim P. 1998. Ectomycorrhizal
community productivity. The application of molecular methods fungal community structure of pinyon pines growing in two environmental
extremes. Ecology 79: 1562–1572.
is already providing detailed insights into the complexity of Gherbi H, Delaruelle C, Selosse MA, Martin F. 1999. High genetic diversity
ECM fungal communities and offers exciting prospects to in a population of the ectomycorrhizal basidiomycete Laccaria amethystina
elucidate processes structuring ECM fungal communities in a 150-year-old beach forest. Molecular Ecology 8: 2003 –2013.
and advance our understanding of plant ecology, such as plant Goodman DM, Trofymow JA. 1998. Comparison of communities of
interactions, and ecosystem processes. ectomycorrhizal fungi in old- growth and mature stands of Douglas-fir at
two sites on southern Vancouver Island. Canadian Journal of Forest Research
28: 574–581.
Acknowledgements Grogan P, Baar J, Bruns TD. 2000. Below-ground ectomycorrhizal
community structure in a recently burned bishop pine forest. Journal of
I thank Robin Sen, Marie-Charlotte Nilsson, Tom Bruns, Ecology 88: 1–13.
van der Heijden GA, Klironomos MU, Moutoglis P, Streitwolf-Engel TB,
Åke Olsson, Roger Finlay and Jan Stenlid for critical reading Wiemken A, Sanders IR. 1998. Mycorrhizal fungal diversity determines
of earlier drafts of this paper. Major support over the years plant biodiversity, ecosystem variability and productivity. Nature 396:
for this research came from the Swedish Council for Forestry 69–72.
and Agricultural Research. Horton TR, Bruns TD. 2001. The molecular revolution in ectomycorrhizal
ecology: peeking into the black-box. Molecular Ecology. (In press.)
Horton TR, Bruns TD. 1998. Multiple-host fungi are the most frequent
References and abundant ectomycorrhizal types in a mixed stand of Douglas fir
(Pseudotsuga menziesii ) and bishop pine (Pinus muricata). New Phytologist
Agerer R. 1987–99. Colour atlas of ectomycorrhizae. Einhorn-Verlag. 139: 331–339.
Schwabisch-Gmund. Jonsson L, Dahlberg A, Nilsson M-C, Kårén O, Zackrisson O. 1999b.
Baar J, Horton TR, Kretzer AM, Bruns TD. 1999. Mycorrhizal Continuity of ectomycorrhizal fungi in self-regenerating boreal forests of
colonisation of Pinus muricata from resistant propagules after a stand Pinus sylvestris : comparative analysis of diversity of mycobionts of seedlings
replacing wildfire. New Phytologist 143: 409–418. and old trees. New Phytologist 142: 151–162.
Bengtsson K. 1998. Which species? What kind of diversity? Jonsson L, Dahlberg A, Nilsson M-C, Zackrisson O, Kårén O. 1999a.
Which ecosystem function? Some problems in studies of relations Ectomycorrhizal fungal communities in late-successional Swedish boreal
between biodiversity and ecosystem function. Applied Soil Ecology 10: forests and composition following wildfire. Molecular Ecology 8: 205 – 217.
191–199. Kårén O, Högberg N, Dahlberg A, Jonsson L, Nylund J-E. 1997.
Bergero R, Perotto S, Girlanda M, Vidano G, Luppi AM. 2000. Ericoid Inter- and intraspecific variation in the ITS region of rDNA of
mycorrhizal fungi are common root associates of a Mediterranean ectomycorrhizal fungi in Fennoscandia as detected by endonuclease
ectomycorrhizal plant (Quercus ilex ). Molecular Ecology 9: 1639–1649. analysis. New Phytologist 136: 313–325.
Bidartondo MI, Baar J, Bruns TD. 2001. Low ectomycorrhizal inoculum Kernaghan G, Harper KA. 2001. Community structure of ectomycorrhizal
potential and diversity from soils in and near ancient forests of bristlecone fungi across an alpine/subalpine ecotone. Ecography 24: 181–188.
pine (Pinus longaeva). Canadian Journal of Botany 79: 293–299. Kõljalg U, Dahlberg A, Taylor A, Larsson E, Hallenberg N, Stenlid J,
Bidartondo MI, Kreitzer AM, Pine EM, Bruns TD. 2000. High root Larsson K-H, Fransson P, Kårén O, Jonsson L. 2000. Diversity and
concentration and uneven ectomycorrhizal diversity near Sarcodes abundance of tomentelloid fungi in Swedish boreal forests. Molecular
sanguinea (Ericaceae): a cheater that stimulates its victims? American Ecology 9: 1985–1996.
Journal of Botany 87: 1783 –1788. Kranabetter JM, Hayden S, Wright EF. 1999. A comparison of
Blackwell M. 2000. Terrestrial life – fungal from the start? Science 289: ectomycorrhizal communities from three conifer species planted on
1884 –1885. forest gap edges. Canadian Journal of Botany 77: 1193 –1198.
Bruns TD, Szaro TM, Gardes M, Cullings KW, Pan JJ, Taylor DL, Kranabetter JM, Wylie T. 1998. Ectomycorrhizal community structure
Horton TR, Kretzer A, Garbelotto M, Li Y. 1998. A sequence data base across forest openings on naturally regenerated western hemlock seedlings.
for the identification of ectomycorrhizal basidiomycetes by phylogenetic Canadian Journal of Botany 76: 189–196.
analysis. Molecular Ecology 7: 257– 272. Lilleskov EA, Bruns TD. 2001. Nitrogen and ectomycorrhizal fungal
Cairney JWG. 1999. Intraspecific physiological variation: implications for communities: what we know, what we need to know. New Phytologist 149:
understanding functional diversity in ectomycorrhizal fungi. Mycorrhiza 9: 154–158.
125 –135. Massicotte HB, Molina R, Tackaberry LE, Smith JE, Amaranthus MP.
Copley J. 2000. Ecology goes underground. Nature 406: 452–454. 1999. Diversity and host specificity of ectomycorrhizal fungi retrieved
Dahlberg A, Jonsson L, Nylund J-E. 1997. Species diversity and from three adjacent forest sites by five host species. Canadian Journal of
distribution of biomass above and below ground among ectomycorrhizal Botany 77: 1053–1976.
Molina R, Massicotte H, Trappe JM. 1992. Specificity phenomena in Smith JE, Molina R, Huso MMP, Larsen MJ. 2000. Occurrence of
mycorrhizal symbioses: Community-ecological consequences and Piloderma fallax in young, rotation-age, and old-growth stands of
practical implications. In: Routledge AMF, ed. Mycorrhizal functioning, Douglas-fir (Pseudotsuga menziesii ) in the Cascade range of Oregon,
an integralive plant – fungal process. New York, USA: Chapman & Hall, U.S.A. Canadian Journal of Botany 78: 995–1001.
Inc., 357– 423. Smith SE, Read DJ. 1997. Mycorrhizal symbiosis, 2nd edn. London, UK:
Moncalvo JM, Lutzoni FM, Rehner SA. 2000. Phylogenetic relationships Academic Press.
of agaric fungi based on nuclear large subunit ribosomal DNA sequences. Stendell ER, Horton TR, Bruns TD. 1999. Early effects of prescribed fire
Systematic Biology 49: 278 – 305. on the structure of the ectomycorrhizal fungus community in a Sierra
Nilsson M-C, Wardle D, Dahlberg A. 1999. Effects of plant litter species Nevada ponderosa pine forest. Mycological Research 103: 1353 –1359.
composition and diversity on the Boreal forest plant-soil system. OIKOS Tammi H, Timonen S, Sen R. 2001. Spatio-temporal colonization of Scots
86: 16 – 26. pine roots by introduced and indigenous ectomycorrhizal fungi in forest
Peter M, Ayer F, Egli S. 2001. Nitrogen addition in a Norway spruce humus and nursery Sphagnum peat microcosms. Canadian Journal of
stand altered macromycete sporocarp production and below-ground Forest Research. (In press.)
ectomycorrhizal species composition measured by PCR-RFLP, Taylor AFS, Martin F, Read DJ. 2000. Fungal diversity in ectomycorrhizal
analysis of the ribosomal ITS-region. New Phytologist. 149: communities of Norway spruce (Picea abies [L.] Karst.) and beech (Fagus
311– 326. sylvatica L.) along north–south transects in Europe. In: E-D, Schulze, ed.
Redecker D, Szaro TM, Bowman RJ, Bruns TD. 2001. Small genets of Carbon and nitrogen cycling in European forest ecosystems. Ecological
Lactarius xantogalactus, Russula cremoricolor and Amanita francheti in late Studies 142: 343–365.
stage ectomycorrhizal successions. Molecular Ecology 10: 1025–1034. Taylor DL, Bruns TD. 1999. Community structure of ectomycorrhizal
Simard SW, Perry DA, Jones MD, Myrold DD, Durall DM, Molina R. fungi in a Pinus muricata forest: minimal overlap between the mature
1997. Net transfer of carbon between ectomycorrhizal tree species in the forest and resistant propagule communities. Molecular Ecology 8:
field. Nature 388: 579 – 582. 1837–1850.
Smith DC, Douglas AE. 1987. The biology of symbiosis. London, UK: Visser S. 1995. Ectomycorrhizal succession in jack pine stands following
Edward Arnold. wildfire. New Phytologist. 129: 389–401.