Targeted proteomics by selected reaction monitoring mass spectrometry: applications to systems biology and biomarker discovery (Q37803137)

23 August 2017

title

Targeted proteomics by selected reaction monitoring mass spectrometry: applications to systems biology and biomarker discovery (English)

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23 August 2017

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20976349

10 August 2024

2

Thomas Kislinger

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20976349

10 August 2024

author name string

Sarah Elschenbroich

1

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23 August 2017

language of work or name

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25 October 2010

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full work available at URL

23 August 2017

http://pubs.rsc.org/en/content/articlepdf/2011/MB/C0MB00159G

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10 August 2024

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23 August 2017

volume

7

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23 August 2017

issue

2

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23 August 2017

page(s)

292-303

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Electrospray ionization for mass spectrometry of large biomolecules

23 August 2017

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Role of spectral counting in quantitative proteomics.

21 January 2018

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Mass spectrometric discovery and selective reaction monitoring (SRM) of putative protein biomarker candidates in first trimester Trisomy 21 maternal serum

21 January 2018

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Differential secreted proteome approach in murine model for candidate biomarker discovery in colon cancer

21 January 2018

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Identification and quantification of preterm birth biomarkers in human cervicovaginal fluid by liquid chromatography/tandem mass spectrometry

21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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Targeted quantitative analysis of Streptococcus pyogenes virulence factors by multiple reaction monitoring

21 January 2018

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Increased Selectivity, Analytical Precision, and Throughput in Targeted Proteomics

21 January 2018

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Quantitative, multiplexed assays for low abundance proteins in plasma by targeted mass spectrometry and stable isotope dilution

21 January 2018

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21 January 2018

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Prediction of high-responding peptides for targeted protein assays by mass spectrometry

21 January 2018

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21 January 2018

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21 January 2018

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Combinatorial peptide libraries facilitate development of multiple reaction monitoring assays for low-abundance proteins

21 January 2018

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21 January 2018

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Multi-site assessment of the precision and reproducibility of multiple reaction monitoring-based measurements of proteins in plasma

21 January 2018

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Clinical quantitation of prostate-specific antigen biomarker in the low nanogram/milliliter range by conventional bore liquid chromatography-tandem mass spectrometry (multiple reaction monitoring) coupling and correlation with ELISA tests

21 January 2018

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Mass spectrometric quantitation of peptides and proteins using Stable Isotope Standards and Capture by Anti-Peptide Antibodies (SISCAPA).

21 January 2018

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Antibody-based enrichment of peptides on magnetic beads for mass-spectrometry-based quantification of serum biomarkers

21 January 2018

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Integrated pipeline for mass spectrometry-based discovery and confirmation of biomarkers demonstrated in a mouse model of breast cancer.

21 January 2018

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An automated and multiplexed method for high throughput peptide immunoaffinity enrichment and multiple reaction monitoring mass spectrometry-based quantification of protein biomarkers

21 January 2018

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Automated screening of monoclonal antibodies for SISCAPA assays using a magnetic bead processor and liquid chromatography-selected reaction monitoring-mass spectrometry

21 January 2018

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Quantification of C-reactive protein in the serum of patients with rheumatoid arthritis using multiple reaction monitoring mass spectrometry and 13C-labeled peptide standards

21 January 2018

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Kinomics: methods for deciphering the kinome

21 January 2018

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Multisite protein modification and intramolecular signaling

21 January 2018

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Multisite phosphorylation of a CDK inhibitor sets a threshold for the onset of DNA replication

21 January 2018

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Regulatory roles of cyclin dependent kinase phosphorylation in cell cycle control

21 January 2018

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Absolute quantification of multisite phosphorylation by selective reaction monitoring mass spectrometry: determination of inhibitory phosphorylation status of cyclin-dependent kinases

21 January 2018

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Absolute quantification of phosphorylation on the kinase activation loop of cellular focal adhesion kinase by stable isotope dilution liquid chromatography/mass spectrometry

21 January 2018

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Assay development for the determination of phosphorylation stoichiometry using multiple reaction monitoring methods with and without phosphatase treatment: application to breast cancer signaling pathways

21 January 2018

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Evaluation of gas-phase rearrangement and competing fragmentation reactions on protein phosphorylation site assignment using collision induced dissociation-MS/MS and MS3.

21 January 2018

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Mechanistic insights into the multistage gas-phase fragmentation behavior of phosphoserine- and phosphothreonine-containing peptides

21 January 2018

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Epidermal growth factor receptor phosphorylation sites Ser991 and Tyr998 are implicated in the regulation of receptor endocytosis and phosphorylations at Ser1039 and Thr1041.

21 January 2018

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Different phosphorylation states of the anaphase promoting complex in response to antimitotic drugs: a quantitative proteomic analysis.

21 January 2018

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Measurement of protein phosphorylation stoichiometry by selected reaction monitoring mass spectrometry

21 January 2018

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Stable isotope-free relative and absolute quantitation of protein phosphorylation stoichiometry by MS

21 January 2018

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Protein glycosylation: nature, distribution, enzymatic formation, and disease implications of glycopeptide bonds

21 January 2018

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Beta 1-6 branching of Asn-linked oligosaccharides is directly associated with metastasis.

21 January 2018

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N-linked glycosylation profiling of pancreatic cancer serum using capillary liquid phase separation coupled with mass spectrometric analysis

21 January 2018

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21 January 2018

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Targeted proteomic strategy for clinical biomarker discovery

21 January 2018

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21 January 2018

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21 January 2018

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Integration with the human genome of peptide sequences obtained by high-throughput mass spectrometry

21 January 2018

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21 January 2018

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Quantification of cardiovascular biomarkers in patient plasma by targeted mass spectrometry and stable isotope dilution.

21 January 2018

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21 January 2018

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21 January 2018

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Multiplexed absolute quantification for proteomics using concatenated signature peptides encoded by QconCAT genes

21 January 2018

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Stoichiometry Determination of the MP1−p14 Complex Using a Novel and Cost-Efficient Method To Produce an Equimolar Mixture of Standard Peptides

21 January 2018

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Isotope-labeled Protein Standards

21 January 2018

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Protein mapping by combined isoelectric focusing and electrophoresis of mouse tissues. A novel approach to testing for induced point mutations in mammals

21 January 2018

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Global survey of organ and organelle protein expression in mouse: combined proteomic and transcriptomic profiling

10 August 2024

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Integrated analysis of protein composition, tissue diversity, and gene regulation in mouse mitochondria

10 August 2024

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Is proteomics the new genomics?

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Integrated proteomic and transcriptomic profiling of mouse lung development and Nmyc target genes

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Method for rapid metabolite profiling of drug candidates in fresh hepatocytes using liquid chromatography coupled with a hybrid quadrupole linear ion trap

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High sensitivity detection of plasma proteins by multiple reaction monitoring of N-glycosites

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Proteomics: from hypothesis to quantitative assay on a single platform. Guidelines for developing MRM assays using ion trap mass spectrometers

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Absolute quantification of the G protein-coupled receptor rhodopsin by LC/MS/MS using proteolysis product peptides and synthetic peptide standards

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Comparative evaluation of current peptide production platforms used in absolute quantification in proteomics

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A multiple reaction monitoring method for absolute quantification of the human liver alcohol dehydrogenase ADH1C1 isoenzyme

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Coupled global and targeted proteomics of human embryonic stem cells during induced differentiation

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Developing multiplexed assays for troponin I and interleukin-33 in plasma by peptide immunoaffinity enrichment and targeted mass spectrometry

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Online immunoaffinity liquid chromatography/tandem mass spectrometry determination of a type II collagen peptide biomarker in rat urine: Investigation of the impact of collision-induced dissociation fluctuation on peptide quantitation

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Quantitative analysis of amyloid beta peptides in cerebrospinal fluid of Alzheimer's disease patients by immunoaffinity purification and stable isotope dilution liquid chromatography/negative electrospray ionization tandem mass spectrometry

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Full dynamic range proteome analysis of S. cerevisiae by targeted proteomics

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Glycosylation of serum ribonuclease 1 indicates a major endothelial origin and reveals an increase in core fucosylation in pancreatic cancer

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Quantitative analysis of an aberrant glycoform of TIMP1 from colon cancer serum by L-PHA-enrichment and SISCAPA with MRM mass spectrometry

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The evolving role of mass spectrometry in cancer biomarker discovery

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Multiple reaction monitoring cubed for protein quantification at the low nanogram/milliliter level in nondepleted human serum

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Identifiers

DOI

10.1039/C0MB00159G

1 reference

23 August 2017

1 reference