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ORCIDAlistair G. Rust
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2010 – 2019
- 2013
[j9]Mamunur Rashid
, Carla Daniela Robles-Espinoza, Alistair G. Rust, David J. Adams:
Cake: a bioinformatics pipeline for the integrated analysis of somatic variants in cancer genomes. Bioinform. 29(17): 2208-2210 (2013)- [c16]Jeroen de Ridder, Jaap Kool, Anthony Uren, Jan Bot, Johann de Jong, Alistair G. Rust, Anton Berns, Maarten van Lohuizen, David J. Adams, Lodewyk F. A. Wessels, Marcel J. T. Reinders:
Mutational Genomics for Cancer Pathway Discovery. PRIB 2013: 35-46 - 2012
- [c15]Faisal Ibne Rezwan, Yi Sun, Neil Davey, Rod Adams, Alistair G. Rust, Mark Robinson:
Using Varying Negative Examples to Improve Computational Predictions of Transcription Factor Binding Sites. EANN 2012: 234-243 - [c14]Faisal Ibne Rezwan, Yi Sun, Neil Davey, Rod Adams, Alistair G. Rust, Mark Robinson:
Improving Transcription Factor Binding Site Predictions by Using Randomised Negative Examples. IPCAT 2012: 225-237 - 2011
- [c13]Faisal Ibne Rezwan, Yi Sun, Neil Davey, Rod Adams, Alistair G. Rust, Mark Robinson:
Effect of Using Varying Negative Examples in Transcription Factor Binding Site Predictions. EvoBio 2011: 1-12 - 2010
- [c12]Faisal Ibne Rezwan, Yi Sun, Neil Davey, Rod Adams, Alistair G. Rust, Mark Robinson:
Using Randomised Vectors in Transcription Factor Binding Site Predictions. ICMLA 2010: 523-527
2000 – 2009
- 2009
- [j8]Yi Sun, Mark Robinson, Rod Adams, Rene te Boekhorst, Alistair G. Rust, Neil Davey:
Integrating genomic binding site predictions using real-valued meta classifiers. Neural Comput. Appl. 18(6): 577-590 (2009) - [j7]Yi Sun, Cristina González Castellano, Mark Robinson, Rod Adams, Alistair G. Rust, Neil Davey:
Using pre & post-processing methods to improve binding site predictions. Pattern Recognit. 42(9): 1949-1958 (2009) - 2008
- [j6]Mark Robinson, Cristina González Castellano, Faisal Ibne Rezwan, Rod Adams, Neil Davey, Alistair G. Rust, Yi Sun:
Combining experts in order to identify binding sites in yeast and mouse genomic data. Neural Networks 21(6): 856-861 (2008) - [j5]Stephen A. Ramsey, Sandy L. Klemm, Daniel E. Zak, Kathleen A. Kennedy, Vesteinn Thorsson, Bin Li, Mark Gilchrist, Elizabeth S. Gold, Carrie D. Johnson, Vladimir Litvak, Garnet Navarro, Jared C. Roach, Carrie M. Rosenberger, Alistair G. Rust, Natalya Yudkovsky, Alan Aderem, Ilya Shmulevich:
Uncovering a Macrophage Transcriptional Program by Integrating Evidence from Motif Scanning and Expression Dynamics. PLoS Comput. Biol. 4(3) (2008) - [c11]Yi Sun, Mark Robinson, Rod Adams, Alistair G. Rust, Neil Davey:
Prediction of Binding Sites in the Mouse Genome Using Support Vector Machines. ICANN (2) 2008: 91-100 - 2007
- [c10]Mark Robinson, Offer Sharabi, Yi Sun, Rod Adams, Rene te Boekhorst, Alistair G. Rust, Neil Davey:
Using Real-Valued Meta Classifiers to Integrate and Contextualize Binding Site Predictions. ICANNGA (1) 2007: 822-829 - [c9]Yi Sun, Mark Robinson, Rod Adams, Neil Davey, Alistair G. Rust:
Predicting Binding Sites in the Mouse Genome. ICMLA 2007: 476-481 - 2006
- [j4]Irina I. Abnizova, Alistair G. Rust, Mark Robinson, Rene te Boekhorst, Walter R. Gilks:
Transcription Binding Site Prediction Using Markov Models. J. Bioinform. Comput. Biol. 4(2): 425-442 (2006) - [c8]Yi Sun, Mark Robinson, Rod Adams, Rene te Boekhorst, Alistair G. Rust, Neil Davey:
Using Feature Selection Filtering Methods for Binding Site Predictions. IEEE ICCI 2006: 566-571 - [c7]Yi Sun, Mark Robinson, Rod Adams, Rene te Boekhorst, Alistair G. Rust, Neil Davey:
Using sampling methods to improve binding site predictions. ESANN 2006: 533-538 - [c6]Mark Robinson, Yi Sun, Rene te Boekhorst, Paul Kaye, Rod Adams, Neil Davey, Alistair G. Rust:
Improving Computational Predictions of Cis- Regulatory Binding Sites. Pacific Symposium on Biocomputing 2006: 391-402 - 2004
- [c5]Yi Sun, Mark Robinson, Rod Adams, Paul Kaye, Alistair G. Rust, Neil Davey:
Integrating Binding Site Predictions Using Non-linear Classification Methods. Deterministic and Statistical Methods in Machine Learning 2004: 229-241 - 2003
- [j3]Michele E. Clamp, T. Daniel Andrews, Daniel Barker, Paul Bevan, Graham Cameron, Yuan Chen, Laura Clarke, Tony Cox, James A. Cuff, Val Curwen, Thomas A. Down, Richard Durbin, Eduardo Eyras, James G. R. Gilbert, Martin Hammond, Tim J. P. Hubbard, Arek Kasprzyk, Damian Keefe, Heikki Lehväslaiho, Vivek Iyer, Craig Melsopp, Emmanuel Mongin, Roger Pettett, Simon C. Potter, Alistair G. Rust, Esther Schmidt, Stephen M. J. Searle, Guy Slater, James A. Smith, William Spooner, Arne Stabenau, Jim Stalker, Elia Stupka, Abel Ureta-Vidal, Imre Vastrik, Ewan Birney:
Ensembl 2002: accommodating comparative genomics. Nucleic Acids Res. 31(1): 38-42 (2003) - 2002
- [j2]Maria J. Schilstra, Alistair G. Rust, Rod Adams, Hamid Bolouri:
A finite state automaton model for multi-neuron simulations. Neurocomputing 44-46: 1141-1148 (2002) - [j1]Tim J. P. Hubbard, Daniel Barker, Ewan Birney, Graham Cameron, Yuan Chen, Laura Clarke, Tony Cox, James A. Cuff, Val Curwen, Thomas A. Down, Richard Durbin, Eduardo Eyras, James G. R. Gilbert, Martin Hammond, Lukasz Huminiecki, Arek Kasprzyk, Heikki Lehväslaiho, Philip Lijnzaad, Craig Melsopp, Emmanuel Mongin, Roger Pettett, Matthew R. Pocock, Simon C. Potter, Alistair G. Rust, Esther Schmidt, Stephen M. J. Searle, Guy Slater, James A. Smith, William Spooner, Arne Stabenau, Jim Stalker, Elia Stupka, Abel Ureta-Vidal, Imre Vastrik, Michele E. Clamp:
The Ensembl genome database project. Nucleic Acids Res. 30(1): 38-41 (2002) - 2001
- [c4]Alistair G. Rust, Rod Adams, Stella J. George, Hamid Bolouri:
Towards Computational Neural Systems through Developmental Evolution. Emergent Neural Computational Architectures Based on Neuroscience 2001: 188-202 - 2000
- [c3]Zhengjun Pan, Alistair G. Rust, Hamid Bolouri:
Image Redundancy Reduction for Neural Network Classification Using Discrete Cosine Transforms. IJCNN (3) 2000: 149-154
1990 – 1999
- 1998
- [b1]Alistair Gibson Rust:
Developmental self-organisation in artificial neural networks. University of Hertfordshire, UK, 1998 - [c2]Hamid Bolouri, Rod Adams, Stella J. George, Alistair G. Rust:
Molecular Self-Organization in the Development Model for the Evolution of Large-scale Artificial Neural Networks. ICONIP 1998: 797-800 - 1997
- [c1]Alistair G. Rust, Rod Adams, Stella J. George, Hamid Bolouri:
Designing Development Rules for Artificial Evolution. ICANNGA 1997: 509-513
Coauthor Index
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