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Serena J. Counsell
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2020 – today
- 2022
- [j29]Yassine Taoudi-Benchekroun, Daan Christiaens, Irina Grigorescu, Oliver Gale-Grant, Andreas Schuh, Maximilian Pietsch, Andrew Chew, Nicholas Harper, Shona Falconer, Tanya Poppe, Emer J. Hughes, Jana Hutter, Anthony N. Price, Jacques-Donald Tournier, Lucilio Cordero-Grande, Serena J. Counsell, Daniel Rueckert, Tomoki Arichi, Joseph V. Hajnal, A. David Edwards, Maria Deprez, Dafnis Batalle:
Predicting age and clinical risk from the neonatal connectome. NeuroImage 257: 119319 (2022) - [c16]Alena Uus, Mohammad-Usamah Ayub, Abi Gartner, Vanessa Kyriakopoulou, Maximilian Pietsch, Irina Grigorescu, Daan Christiaens, Jana Hutter, Lucilio Cordero-Grande, Anthony Price, Dafnis Batalle, Serena J. Counsell, Joseph V. Hajnal, A. David Edwards, Mary A. Rutherford, Maria Deprez:
Segmentation of Periventricular White Matter in Neonatal Brain MRI: Analysis of Brain Maturation in Term and Preterm Cohorts. PIPPI@MICCAI 2022: 94-104 - 2021
- [j28]Ralica Dimitrova, Maximilian Pietsch, Judit Ciarrusta, Sean P. Fitzgibbon, Logan Z. J. Williams, Daan Christiaens, Lucilio Cordero-Grande, Dafnis Batalle, Antonios Makropoulos, Andreas Schuh, Anthony N. Price, Jana Hutter, Rui Pedro A. G. Teixeira, Emer J. Hughes, Andrew Chew, Shona Falconer, Olivia Carney, Alexia Egloff, Jacques-Donald Tournier, Grainne M. McAlonan, Mary A. Rutherford, Serena J. Counsell, Emma C. Robinson, Joseph V. Hajnal, Daniel Rueckert, A. David Edwards, Jonathan O'Muircheartaigh:
Preterm birth alters the development of cortical microstructure and morphology at term-equivalent age. NeuroImage 243: 118488 (2021) - [c15]Russell Macleod, Serena J. Counsell, David W. Carmichael, Ralica Dimitrova, Maximilian Pietsch, A. David Edwards, Mary A. Rutherford, Jonathan O'Muircheartaigh:
Detection of Injury and Automated Triage of Preterm Neonatal MRI Using Patch-Based Gaussian Processes. UNSURE/PIPPI@MICCAI 2021: 231-241 - 2020
- [j27]Maria Deprez, Anthony Price, Daan Christiaens, Georgia Lockwood Estrin, Lucilio Cordero-Grande, Jana Hutter, Alessandro Daducci, Jacques-Donald Tournier, Mary A. Rutherford, Serena J. Counsell, Meritxell Bach Cuadra, Joseph V. Hajnal:
Higher Order Spherical Harmonics Reconstruction of Fetal Diffusion MRI With Intensity Correction. IEEE Trans. Medical Imaging 39(4): 1104-1113 (2020) - [c14]Russell Macleod, Jonathan O'Muircheartaigh, A. David Edwards, David W. Carmichael, Mary A. Rutherford, Serena J. Counsell:
Automatic Detection of Neonatal Brain Injury on MRI. ASMUS/PIPPI@MICCAI 2020: 324-333
2010 – 2019
- 2019
- [j26]Dafnis Batalle, Jonathan O'Muircheartaigh, Antonios Makropoulos, Christopher J. Kelly, Ralica Dimitrova, Emer J. Hughes, Joseph V. Hajnal, Hui Zhang, Daniel C. Alexander, A. David Edwards, Serena J. Counsell:
Different patterns of cortical maturation before and after 38 weeks gestational age demonstrated by diffusion MRI in vivo. NeuroImage 185: 764-775 (2019) - [j25]Maximilian Pietsch, Daan Christiaens, Jana Hutter, Lucilio Cordero-Grande, Anthony N. Price, Emer J. Hughes, A. David Edwards, Joseph V. Hajnal, Serena J. Counsell, Jacques-Donald Tournier:
A framework for multi-component analysis of diffusion MRI data over the neonatal period. NeuroImage 186: 321-337 (2019) - 2018
- [j24]Antonios Makropoulos, Serena J. Counsell, Daniel Rueckert:
A review on automatic fetal and neonatal brain MRI segmentation. NeuroImage 170: 231-248 (2018) - [j23]Antonios Makropoulos, Emma C. Robinson, Andreas Schuh, Robert Wright, Sean P. Fitzgibbon, Jelena Bozek, Serena J. Counsell, Johannes K. Steinweg, Katy Vecchiato, Jonathan Passerat-Palmbach, Gregor Lenz, Filippo Mortari, Tencho Tenev, Eugene P. Duff, Matteo Bastiani, Lucilio Cordero-Grande, Emer J. Hughes, Nora Tusor, Daniel Rueckert:
The developing human connectome project: A minimal processing pipeline for neonatal cortical surface reconstruction. NeuroImage 173: 88-112 (2018) - 2017
- [j22]Dafnis Batalle, Emer J. Hughes, Hui Zhang, Jacques-Donald Tournier, Nora Tusor, Paul Aljabar, Luqman Wali, Daniel C. Alexander, Joseph V. Hajnal, Chiara Nosarti, A. David Edwards, Serena J. Counsell:
Early development of structural networks and the impact of prematurity on brain connectivity. NeuroImage 149: 379-392 (2017) - [j21]Diliana Pecheva, Paul A. Yushkevich, Dafnis Batalle, Emer J. Hughes, Paul Aljabar, Julia Wurie, Joseph V. Hajnal, A. David Edwards, Daniel C. Alexander, Serena J. Counsell, Hui Zhang:
A tract-specific approach to assessing white matter in preterm infants. NeuroImage 157: 675-694 (2017) - [j20]Kristin Keunen, Serena J. Counsell, Manon J. N. L. Benders:
The emergence of functional architecture during early brain development. NeuroImage 160: 2-14 (2017) - 2016
- [j19]Gareth Ball, Paul Aljabar, Tomoki Arichi, Nora Tusor, D. Cox, Nazakat Merchant, P. Nongena, Joseph V. Hajnal, A. David Edwards, Serena J. Counsell:
Machine-learning to characterise neonatal functional connectivity in the preterm brain. NeuroImage 124: 267-275 (2016) - [j18]Antonios Makropoulos, Paul Aljabar, Robert Wright, Britta Hüning, Nazakat Merchant, Tomoki Arichi, Nora Tusor, Joseph V. Hajnal, A. David Edwards, Serena J. Counsell, Daniel Rueckert:
Regional growth and atlasing of the developing human brain. NeuroImage 125: 456-478 (2016) - 2015
- [j17]Ivana Isgum, Manon J. N. L. Benders, Brian B. Avants, Manuel Jorge Cardoso, Serena J. Counsell, Elda Fischi Gomez, Laura Gui, Petra S. Hüppi, Karina J. Kersbergen, Antonios Makropoulos, Andrew Melbourne, Pim Moeskops, Christian P. Mol, Maria Kuklisova-Murgasova, Daniel Rueckert, Julia A. Schnabel, Vedran Srhoj-Egekher, Jue Wu, Siying Wang, Linda S. de Vries, Max A. Viergever:
Evaluation of automatic neonatal brain segmentation algorithms: The NeoBrainS12 challenge. Medical Image Anal. 20(1): 135-151 (2015) - [c13]Veronika A. M. Zimmer, Ben Glocker, Paul Aljabar, Serena J. Counsell, Mary A. Rutherford, A. David Edwards, Joseph V. Hajnal, Miguel Ángel González Ballester, Daniel Rueckert, Gemma Piella:
Learning and Combining Image Similarities for Neonatal Brain Population Studies. MLMI 2015: 110-117 - 2014
- [j16]Antonios Makropoulos, Ioannis S. Gousias, Christian Ledig, Paul Aljabar, Ahmed Serag, Joseph V. Hajnal, A. David Edwards, Serena J. Counsell, Daniel Rueckert:
Automatic Whole Brain MRI Segmentation of the Developing Neonatal Brain. IEEE Trans. Medical Imaging 33(9): 1818-1831 (2014) - [c12]Andreas Schuh, Maria Murgasova, Antonios Makropoulos, Christian Ledig, Serena J. Counsell, Joseph V. Hajnal, Paul Aljabar, Daniel Rueckert:
Construction of a 4D Brain Atlas and Growth Model Using Diffeomorphic Registration. STIA 2014: 27-37 - 2013
- [c11]Markus Schirmer, Gareth Ball, Serena J. Counsell, A. David Edwards, Daniel Rueckert, Joseph V. Hajnal, Paul Aljabar:
Normalisation of Neonatal Brain Network Measures Using Stochastic Approaches. MICCAI (1) 2013: 574-581 - 2012
- [j15]Ahmed Serag, Paul Aljabar, Gareth Ball, Serena J. Counsell, James P. Boardman, Mary A. Rutherford, A. David Edwards, Joseph V. Hajnal, Daniel Rueckert:
Construction of a consistent high-definition spatio-temporal atlas of the developing brain using adaptive kernel regression. NeuroImage 59(3): 2255-2265 (2012) - [j14]Ioannis S. Gousias, A. David Edwards, Mary A. Rutherford, Serena J. Counsell, Joseph V. Hajnal, Daniel Rueckert, Alexander Hammers:
Magnetic resonance imaging of the newborn brain: Manual segmentation of labelled atlases in term-born and preterm infants. NeuroImage 62(3): 1499-1509 (2012) - [j13]Tomoki Arichi, Gianlorenzo Fagiolo, Marta Varela, Alejandro Melendez-Calderon, Alessandro Allievi, Nazakat Merchant, Nora Tusor, Serena J. Counsell, Etienne Burdet, Christian F. Beckmann, A. David Edwards:
Development of BOLD signal hemodynamic responses in the human brain. NeuroImage 63(2): 663-673 (2012) - [j12]Ahmed Serag, Paul Aljabar, Gareth Ball, Serena J. Counsell, James P. Boardman, Mary A. Rutherford, A. David Edwards, Joseph V. Hajnal, Daniel Rueckert:
Erratum to Construction of a consistent high-definition spatio-temporal atlas of the developing brain using adaptive kernel regression [NeuroImage 59/3(2012) 2255-2265]. NeuroImage 63(2): 998 (2012) - [j11]Emer J. Hughes, Jacqueline Bond, Patricia Svrckova, Antonios Makropoulos, Gareth Ball, David J. Sharp, A. David Edwards, Joseph V. Hajnal, Serena J. Counsell:
Regional changes in thalamic shape and volume with increasing age. NeuroImage 63(3): 1134-1142 (2012) - [c10]Ahmed Serag, Paul Aljabar, Serena J. Counsell, James P. Boardman, Joseph V. Hajnal, Daniel Rueckert:
LISA: Longitudinal image registration via spatio-temporal atlases. ISBI 2012: 334-337 - [c9]Ahmed Serag, Ioannis S. Gousias, Antonios Makropoulos, Paul Aljabar, Joseph V. Hajnal, James P. Boardman, Serena J. Counsell, Daniel Rueckert:
Unsupervised Learning of Shape Complexity: Application to Brain Development. STIA 2012: 88-99 - 2011
- [j10]Maria Kuklisova-Murgasova, Paul Aljabar, Latha Srinivasan, Serena J. Counsell, Valentina Doria, Ahmed Serag, Ioannis S. Gousias, James P. Boardman, Mary A. Rutherford, A. David Edwards, Joseph V. Hajnal, Daniel Rueckert:
A dynamic 4D probabilistic atlas of the developing brain. NeuroImage 54(4): 2750-2763 (2011) - [j9]Paul Aljabar, Robin Wolz, Latha Srinivasan, Serena J. Counsell, Mary A. Rutherford, A. David Edwards, Joseph V. Hajnal, Daniel Rueckert:
A Combined Manifold Learning Analysis of Shape and Appearance to Characterize Neonatal Brain Development. IEEE Trans. Medical Imaging 30(12): 2072-2086 (2011) - [c8]Ahmed Serag, Paul Aljabar, Serena J. Counsell, James P. Boardman, Joseph V. Hajnal, Daniel Rueckert:
Tracking developmental changes in subcortical structures of the preterm brain using multi-modal MRI. ISBI 2011: 349-352 - [c7]Ahmed Serag, Paul Aljabar, Serena J. Counsell, James P. Boardman, Joseph V. Hajnal, Daniel Rueckert:
Construction of a 4D atlas of the developing brain using non-rigid registration. ISBI 2011: 1532-1535 - [c6]Ahmed Serag, Paul Aljabar, Serena J. Counsell, James P. Boardman, Joseph V. Hajnal, Daniel Rueckert:
A Four-dimensional Atlas of Neonatal Brain MRI. MIUA 2011: 201-206 - 2010
- [j8]Tomoki Arichi, A. Moraux, A. Melendez, Valentina Doria, M. Groppo, Nazakat Merchant, S. Combs, Etienne Burdet, David J. Larkman, Serena J. Counsell, Christian F. Beckmann, A. David Edwards:
Somatosensory cortical activation identified by functional MRI in preterm and term infants. NeuroImage 49(3): 2063-2071 (2010) - [j7]James P. Boardman, C. Craven, S. Valappil, Serena J. Counsell, Leigh Dyet, Daniel Rueckert, Paul Aljabar, Mary A. Rutherford, A. T. M. Chew, Joanna M. Allsop, Frances M. Cowan, A. David Edwards:
A common neonatal image phenotype predicts adverse neurodevelopmental outcome in children born preterm. NeuroImage 52(2): 409-414 (2010) - [j6]Gareth Ball, Serena J. Counsell, Mustafa Anjari, Nazakat Merchant, Tomoki Arichi, Valentina Doria, Mary A. Rutherford, A. David Edwards, Daniel Rueckert, James P. Boardman:
An optimised tract-based spatial statistics protocol for neonates: Applications to prematurity and chronic lung disease. NeuroImage 53(1): 94-102 (2010) - [c5]Paul Aljabar, Robin Wolz, Latha Srinivasan, Serena J. Counsell, James P. Boardman, Maria Murgasova, Valentina Doria, Mary A. Rutherford, A. David Edwards, Joseph V. Hajnal:
Combining Morphological Information in a Manifold Learning Framework: Application to Neonatal MRI. MICCAI (3) 2010: 1-8
2000 – 2009
- 2007
- [j5]Carlos E. Thomaz, James P. Boardman, Serena J. Counsell, Derek L. G. Hill, Joseph V. Hajnal, A. David Edwards, Mary A. Rutherford, Duncan Fyfe Gillies, Daniel Rueckert:
A multivariate statistical analysis of the developing human brain in preterm infants. Image Vis. Comput. 25(6): 981-994 (2007) - [j4]Serena J. Counsell, Leigh Dyet, David J. Larkman, Rita Gouveia Nunes, James P. Boardman, Joanna M. Allsop, Julie Fitzpatrick, Latha Srinivasan, Frances M. Cowan, Joseph V. Hajnal, Mary A. Rutherford, A. David Edwards:
Thalamo-cortical connectivity in children born preterm mapped using probabilistic magnetic resonance tractography. NeuroImage 34(3): 896-904 (2007) - [j3]Mustafa Anjari, Latha Srinivasan, Joanna M. Allsop, Joseph V. Hajnal, Mary A. Rutherford, A. David Edwards, Serena J. Counsell:
Diffusion tensor imaging with tract-based spatial statistics reveals local white matter abnormalities in preterm infants. NeuroImage 35(3): 1021-1027 (2007) - [c4]Shuzhou Jiang, Hui Xue, Serena J. Counsell, Mustafa Anjari, Joanna M. Allsop, Mary A. Rutherford, Daniel Rueckert, Joseph V. Hajnal:
In-utero Three Dimension High Resolution Fetal Brain Diffusion Tensor Imaging. MICCAI (1) 2007: 18-26 - [c3]Kanwal K. Bhatia, Paul Aljabar, James P. Boardman, Latha Srinivasan, Maria Murgasova, Serena J. Counsell, Mary A. Rutherford, Joseph V. Hajnal, A. David Edwards, Daniel Rueckert:
Groupwise Combined Segmentation and Registration for Atlas Construction. MICCAI (1) 2007: 532-540 - 2006
- [j2]James P. Boardman, Serena J. Counsell, Daniel Rueckert, Olga Kapellou, Kanwal K. Bhatia, Paul Aljabar, Joseph V. Hajnal, Joanna M. Allsop, Mary A. Rutherford, A. David Edwards:
Abnormal deep grey matter development following preterm birth detected using deformation-based morphometry. NeuroImage 32(1): 70-78 (2006) - [j1]Christina Malamateniou, Serena J. Counsell, Joanna M. Allsop, Julie Fitzpatrick, Latha Srinivasan, Frances M. Cowan, Joseph V. Hajnal, Mary A. Rutherford:
The effect of preterm birth on neonatal cerebral vasculature studied with magnetic resonance angiography at 3 Tesla. NeuroImage 32(3): 1050-1059 (2006) - [c2]Carlos E. Thomaz, James P. Boardman, Serena J. Counsell, Derek L. G. Hill, Joseph V. Hajnal, A. David Edwards, Mary A. Rutherford, Duncan Fyfe Gillies, Daniel Rueckert:
A whole brain morphometric analysis of changes associated with pre-term birth. Image Processing 2006: 61445Y - 2003
- [c1]James P. Boardman, Kanwal K. Bhatia, Serena J. Counsell, Joanna M. Allsop, Olga Kapellou, Mary A. Rutherford, A. David Edwards, Joseph V. Hajnal, Daniel Rueckert:
An Evaluation of Deformation-Based Morphometry Applied to the Developing Human Brain and Detection of Volumetric Changes Associated with Preterm Birth. MICCAI (1) 2003: 697-704
Coauthor Index
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