Rapid Assessments of Amazon Forest Structure and Biomass Using Small Unmanned Aerial Systems
Abstract
:1. Introduction
2. Materials and Methods
2.1. Study Site
2.2. Aircraft Operation and Data Collection
2.3. Image Georeferencing and Structure-from-Motion Processing
2.4. SFM to LiDAR Model Registration
2.5. Canopy Height Model Creation and Evaluation
2.6. Aboveground Carbon Estimation
2.7. Validation
3. Results
3.1. Top of Canopy Height
3.2. Aboveground Carbon Density
4. Discussion
4.1. Improvements
4.2. Future Directions
5. Conclusions
Acknowledgments
Author Contributions
Conflicts of Interest
Abbreviations
UAV | Unmanned aerial vehicle |
ACD | Aboveground carbon density |
SFM | Structure-from-motion |
LiDAR | Light detection and ranging |
TCH | Top of canopy height |
PES | Payment for ecosystem services |
REDD+ | Reducing emissions from deforestation and forest degradation |
LCLUC | Land cover/land-use change |
ASGM | Artisanal-scale gold mining |
CAO | Carnegie Airborne Observatory |
AToMS | Airborne Taxonomic Mapping System |
GSD | Ground sample distance |
CHM | Canopy height model |
GPS | Global positioning system |
GCP | Ground control point |
DCM | Digital canopy model |
DTM | Digital terrain model |
RMSE | Root mean square error |
EACD | Estimated aboveground carbon density |
UHF | Ultra-high frequency |
RADAR | Radio detection and ranging |
CLASlite | Carnegie Landsat Analysis System lite |
SRTM | Shuttle RADAR Topography Mission |
Appendix A
Parameter Name | Selected Value |
---|---|
Align photos | |
Accuracy | Highest |
Pair preselection | Reference |
Key point limit | 40,000 |
Tie point limit | 4000 |
Build dense cloud | |
Quality | Ultra high |
Depth filtering | Aggressive |
Build DEM | |
Source data | Dense cloud |
Interpolation | Enabled |
Point classes | All |
Resolution (m/pix) | 1 |
References
- Van der Werf, G.R.; Morton, D.C.; DeFries, R.S.; Olivier, J.G.J.; Kasibhatla, P.S.; Jackson, R.B.; Collatz, G.J.; Randerson, J.T. CO2 emissions from forest loss. Nat. Geosci. 2009, 2, 737–738. [Google Scholar] [CrossRef]
- Koh, L.P.; Wilcove, D.S. Is oil palm agriculture really destroying tropical biodiversity? Conserv. Lett. 2008, 1, 60–64. [Google Scholar] [CrossRef]
- Peres, C.A. Synergistic effects of subsistence hunting and habitat fragmentation on Amazonian forest vertebrates. Conserv. Biol. 2001, 15, 1490–1505. [Google Scholar] [CrossRef]
- Román-Dañobeytia, F.; Huayllani, M.; Michi, A.; Ibarra, F.; Loayza-Muro, R.; Vázquez, T.; Rodríguez, L.; García, M. Reforestation with four native tree species after abandoned gold mining in the Peruvian Amazon. Ecol. Eng. 2015, 85, 39–46. [Google Scholar] [CrossRef]
- Bunker, D.E.; DeClerck, F.; Bradford, J.C.; Colwell, R.K.; Perfecto, I.; Phillips, O.L.; Sankaran, M.; Naeem, S. Species loss and aboveground carbon storage in a tropical forest. Science 2005, 310, 1029–1031. [Google Scholar] [CrossRef] [PubMed]
- De Sy, V.; Herold, M.; Achard, F.; Asner, G.P.; Held, A.; Kellndorfer, J.; Verbesselt, J. Synergies of multiple remote sensing data sources for REDD+ monitoring. Curr. Opin. Environ. Sustain. 2012, 4, 696–706. [Google Scholar] [CrossRef]
- Baccini, A.; Goetz, S.J.; Walker, W.S.; Laporte, N.T.; Sun, M.; Sulla-Menashe, D.; Hackler, J.; Beck, P.S.A.; Dubayah, R.; Friedl, M.A.; et al. Estimated carbon dioxide emissions from tropical deforestation improved by carbon-density maps. Nat. Clim. Chang. 2012, 2, 182–185. [Google Scholar] [CrossRef]
- Lu, D.; Chen, Q.; Wang, G.; Liu, L.; Li, G.; Moran, E. A survey of remote sensing-based aboveground biomass estimation methods in forest ecosystems. Int. J. Digit. Earth 2014, 9, 63–105. [Google Scholar] [CrossRef]
- Fisher, J.I.; Hurtt, G.C.; Thomas, R.Q.; Chambers, J.Q. Clustered disturbances lead to bias in large-scale estimates based on forest sample plots. Ecol. Lett. 2008, 11, 554–563. [Google Scholar] [CrossRef] [PubMed]
- Marvin, D.C.; Asner, G.P.; Knapp, D.E.; Anderson, C.B.; Martin, R.E.; Sinca, F.; Tupayachi, R. Amazonian landscapes and the bias in field studies of forest structure and biomass. Proc. Natl. Acad. Sci. USA 2014, 111, E5224–E5232. [Google Scholar] [CrossRef] [PubMed]
- Erdody, T.L.; Moskal, L.M. Fusion of LiDAR and imagery for estimating forest canopy fuels. Remote Sens. Environ. 2010, 114, 725–737. [Google Scholar] [CrossRef]
- Dandois, J.P.; Ellis, E.C. High spatial resolution three-dimensional mapping of vegetation spectral dynamics using computer vision. Remote Sens. Environ. 2013, 136, 259–276. [Google Scholar] [CrossRef]
- Achard, F.; Eva, H.D.; Stibig, H.; Mayaux, P.; Richards, T.; Malingreau, J.; Achard, F.; Eva, H.D.; Stibig, H.; Mayaux, P.; et al. Determination of deforestation rates of the world’s humid tropical forests. Science 2002, 297, 999–1002. [Google Scholar] [CrossRef] [PubMed]
- Achard, F.; Beuchle, R.; Mayaux, P.; Stibig, H.-J.; Bodart, C.; Brink, A.; Carboni, S.; Desclée, B.; Donnay, F.; Eva, H.D.; et al. Determination of tropical deforestation rates and related carbon losses from 1990 to 2010. Glob. Chang. Biol. 2014, 20, 2540–2554. [Google Scholar] [CrossRef] [PubMed]
- Asner, G.P.; Llactayo, W.; Tupayachi, R.; Ráez Luna, E. Elevated rates of gold mining in the Amazon revealed through high-resolution monitoring. Proc. Natl. Acad. Sci. USA 2013, 110, 18454–18459. [Google Scholar] [CrossRef] [PubMed]
- Asner, G.P. Automated mapping of tropical deforestation and forest degradation: CLASlite. J. Appl. Remote Sens. 2009, 3, 033543. [Google Scholar] [CrossRef]
- Hansen, M.C.; Potapov, P.V.; Moore, R.; Hancher, M.; Turubanova, S.A.; Tyukavina, A.; Thau, D.; Stehman, S.V.; Goetz, S.J.; Loveland, T.R.; et al. High-resolution global maps of 21st-century forest cover change. Science 2013, 342, 850–853. [Google Scholar] [CrossRef] [PubMed]
- Swenson, J.J.; Carter, C.E.; Domec, J.-C.; Delgado, C.I. Gold mining in the Peruvian Amazon: Global prices, deforestation, and mercury imports. PLoS ONE 2011, 6, e18875. [Google Scholar] [CrossRef] [PubMed] [Green Version]
- Finer, M.; Novoa, S. MAAP Synthesis #1: Patterns and Drivers of Deforestation in the Peruvian Amazon. Available online: http://maaproject.org/2015/maap-synthesis1/ (accessed on 6 November 2015).
- Koh, L.P.; Wich, S. Dawn of drone ecology: low-cost autonomous aerial vehicles for conservation. Trop. Conserv. Sci. 2012, 5, 121–132. [Google Scholar]
- Anderson, K.; Gaston, K.J. Lightweight unmanned aerial vehicles will revolutionize spatial ecology. Front. Ecol. Environ. 2013, 11, 138–146. [Google Scholar] [CrossRef]
- Snavely, N.; Seitz, S.M.; Szeliski, R. Modeling the world from Internet photo collections. Int. J. Comput. Vis. 2008, 80, 189–210. [Google Scholar] [CrossRef]
- Dandois, J.P.; Ellis, E.C. Remote sensing of vegetation structure using computer vision. Remote Sens. 2010, 2, 1157–1176. [Google Scholar] [CrossRef]
- Lisein, J.; Pierrot-Deseilligny, M.; Bonnet, S.; Lejeune, P. A Photogrammetric workflow for the creation of a forest canopy height model from small unmanned aerial system imagery. Forests 2013, 4, 922–944. [Google Scholar] [CrossRef]
- St-Onge, B.; Achaichia, N. Measuring forest canopy height using a combination of LiDAR and aerial photography data. Int. Arch. Photogramm. Remote Sens. Spat. Inf. Sci. 2001, XXXIV-3/W4, 131–137. [Google Scholar]
- Puliti, S.; Olerka, H.; Gobakken, T.; Næsset, E. Inventory of small forest areas using an unmanned aerial system. Remote Sens. 2015, 7, 9632–9654. [Google Scholar] [CrossRef] [Green Version]
- Wallace, L.; Lucieer, A.; Malenovský, Z.; Turner, D.; Vopěnka, P. Assessment of forest structure using two UAV techniques: A comparison of airborne laser scanning and structure from motion (SfM) point clouds. Forests 2016, 7, 62. [Google Scholar] [CrossRef]
- Asner, G.P.; Knapp, D.E.; Boardman, J.; Green, R.O.; Kennedy-Bowdoin, T.; Eastwood, M.; Martin, R.E.; Anderson, C.; Field, C.B. Carnegie Airborne Observatory-2: Increasing science data dimensionality via high-fidelity multi-sensor fusion. Remote Sens. Environ. 2012, 124, 454–465. [Google Scholar] [CrossRef]
- Asner, G.P.; Mascaro, J. Mapping tropical forest carbon: Calibrating plot estimates to a simple LiDAR metric. Remote Sens. Environ. 2014, 140, 614–624. [Google Scholar] [CrossRef]
- Dandois, J.; Olano, M.; Ellis, E. Optimal altitude, overlap, and weather conditions for computer vision UAV estimates of forest structure. Remote Sens. 2015, 7, 13895–13920. [Google Scholar] [CrossRef]
- Asner, G.P.; Powell, G.V.N.; Mascaro, J.; Knapp, D.E.; Clark, J.K.; Jacobson, J.; Kennedy-Bowdoin, T.; Balaji, A.; Paez-Acosta, G.; Victoria, E.; et al. High-resolution forest carbon stocks and emissions in the Amazon. Proc. Natl. Acad. Sci. USA 2010, 107, 16738–16742. [Google Scholar] [CrossRef] [PubMed]
- Mascaro, J.; Detto, M. Evaluating uncertainty in mapping forest carbon with airborne LiDAR. Remote Sens. Environ. 2011, 115, 3770–3774. [Google Scholar] [CrossRef]
- Chave, J.; Andalo, C.; Brown, S.; Cairns, M. Tree allometry and improved estimation of carbon stocks and balance in tropical forests. Oecologia 2005, 145, 87–99. [Google Scholar] [CrossRef] [PubMed]
- Asner, G.P.; Mascaro, J.; Muller-Landau, H.C.; Vieilledent, G.; Vaudry, R.; Rasamoelina, M.; Hall, J.S.; van Breugel, M. A universal airborne LiDAR approach for tropical forest carbon mapping. Oecologia 2012, 168, 1147–1160. [Google Scholar] [CrossRef] [PubMed]
- Mitchard, E.T.A.; Feldpausch, T.R.; Brienen, R.J.W.; Lopez-Gonzalez, G.; Monteagudo, A.; Baker, T.R.; Lewis, S.L.; Lloyd, J.; Quesada, C.A.; Gloor, M.; et al. Markedly divergent estimates of Amazon forest carbon density from ground plots and satellites. Glob. Ecol. Biogeogr. 2014, 23, 935–946. [Google Scholar] [CrossRef] [PubMed] [Green Version]
- Boyd, D.; Hill, R.; Hopkinson, C.; Baker, T. Landscape-scale forest disturbance regimes in Southern Peruvian Amazonia. Ecol. Appl. 2013, 23, 1588–1602. [Google Scholar] [CrossRef] [PubMed]
- Chambers, J.; Negron-Juarez, R.; Magnabosco Marra, D.; Di Vittorio, A.; Tews, J.; Roberts, D.; Ribeiro, G.; Trumbore, S.; Higuchi, N. The steady-state mosaic of disturbance and succession across an old-growth Central Amazon forest landscape. Proc. Natl. Acad. Sci. USA 2012, 110, 3949–3954. [Google Scholar] [CrossRef] [PubMed]
- Gaulton, R.; Taylor, J.; Watkins, N. Unmanned Aerial Vehicles for Pre-Harvest Biomass Estimation in Willow (Salix spp.) Coppice Plantations. Available online: https://geouav.teledetection.fr/papers/GEOSPATIAL_WEEK_2015_284.pdf (accessed on 4 November 2015).
- Asner, G. Tropical forest carbon assessment: Integrating satellite and airborne mapping approaches. Environ. Res. Lett. 2009, 4, 034009. [Google Scholar] [CrossRef]
- Turner, D.; Lucieer, A.; Wallace, L. Direct georeferencing of ultrahigh-resolution UAV imagery. IEEE Trans. Geosci. Remote Sens. 2014, 52, 2738–2745. [Google Scholar] [CrossRef]
- Bourgine, B.; Baghdadi, N. Assessment of C-band SRTM DEM in a dense equatorial forest zone. Extern. Geophys. Clim. Environ. 2005, 337, 1225–1234. [Google Scholar] [CrossRef]
- Cunliffe, A.; Brazier, R.; Anderson, K. Ultra-fine grain landscape-scale quantification of dryland vegetation structure with drone-acquired structure-from-motion photogrammetry. Remote Sens. Environ. 2016, 183, 129–143. [Google Scholar] [CrossRef] [Green Version]
- Getzin, S.; Wiegand, K.; Schöning, I. Assessing biodiversity in forests using very high-resolution images and unmanned aerial vehicles. Methods Ecol. Evol. 2012, 3, 397–404. [Google Scholar] [CrossRef]
- Grassi, G.; Monni, S.; Federici, S. Applying the conservativeness principle to REDD to deal with the uncertainties of the estimates. Environ. Res. Lett. 2008, 3, 035005. [Google Scholar] [CrossRef]
- Angelsen, A.; Brown, S.; Loisel, C.; Peskett, L.; Streck, C.; Zarin, D. Reducing Emissions from Deforestation and Forest Degradation (REDD): An Options Assessment Report; International Information System for the Agricultural Science and Technology (AGRIS); Food and Agriculture Organization of the United Nations (FAO): Rome, Italy, 2009. [Google Scholar]
Parameter | BA (m2·ha−1) | ρBA (g·cm−3) | α | b1 | b2 | b3 |
---|---|---|---|---|---|---|
Value | 23.8 | 0.53 | 3.8358 | 0.2807 | 0.9721 | 1.3763 |
© 2016 by the authors; licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC-BY) license (http://creativecommons.org/licenses/by/4.0/).
Share and Cite
Messinger, M.; Asner, G.P.; Silman, M. Rapid Assessments of Amazon Forest Structure and Biomass Using Small Unmanned Aerial Systems. Remote Sens. 2016, 8, 615. https://doi.org/10.3390/rs8080615
Messinger M, Asner GP, Silman M. Rapid Assessments of Amazon Forest Structure and Biomass Using Small Unmanned Aerial Systems. Remote Sensing. 2016; 8(8):615. https://doi.org/10.3390/rs8080615
Chicago/Turabian StyleMessinger, Max, Gregory P. Asner, and Miles Silman. 2016. "Rapid Assessments of Amazon Forest Structure and Biomass Using Small Unmanned Aerial Systems" Remote Sensing 8, no. 8: 615. https://doi.org/10.3390/rs8080615