… more complex repeat sequence variants. Here, we consider the problem of genotyping
Variable Number Tandem Repeats (VNTRs), composed of inexact tandem duplications of short (6…

… , adVNTR-NN, can genotype 10K VNTRs for an individual in 50 cpu hours with high accuracy.
We used adVNTR-NN to genotype … We pursue a targeted genotyping approach which has …

… unmeasured variables, we tested the association in carriers of a single recurring PV in
BRCA1. We performed targeted-capture to sequence VNTRs, called genotypes with adVNTR, …

… In this paper, we presented adVNTR to genotype VNTRs using major next generation
sequencing technologies. Our method train a model for each specific target, allowing us to tailor …

… This review focuses on the role and action of repetitive DNA, specifically variable number
tandem repeats and SINE-VNTR-Alu domains, highlighting their role in modification of gene …

… , adVNTR, for genotyping VNTRs at targeted loci in a donor genome. For any target 94 VNTR
in a donor, adVNTR … It trains Hidden Markov Models (HMMs) for each target VNTR locus, …

… repeat sequence variants. We consider the problem of genotyping Variable Number Tandem
Repeats (VNTRs), composed of inexact tandem duplications of short (6 − 100 bp) repeat…

… and genotyping tandem repeats. While many dozens of diseases have now been described
in association tandem repeats … motif counts for targeted VNTR loci, with adVNTR-NN using a …

… We focused on two sets of target VNTRs on the human genome: 2,254 short coding VNTRs
(… , and genotyped each set of reads assigned to each VNTR. Code-adVNTR genotyped 2,237 …

… variable number tandem repeats (VNTRs) or minisatellites, have been less well studied.
This is largely due to technical difficulties of genotyping … Numerous targeted studies in the …