Heterocyclic Compounds: Lecture Note-3 Organic Chemistry CHE 502
Heterocyclic Compounds: Lecture Note-3 Organic Chemistry CHE 502
Heterocyclic Compounds: Lecture Note-3 Organic Chemistry CHE 502
HETEROCYCLIC COMPOUNDS
DEPARTMENT OF CHEMISTRY
UTTARAKHAND OPEN UNIVERSITY
UNIT 4: HETEROCYCLIC COMPOUNDS- I
CONTENTS
4.1 Objectives
4.2 Introduction
4.3 Classification of heterocyclic compounds
4.4 Nomenclature of heterocyclic compounds
4.5 Molecular orbital picture
4.6 Structure and aromaticity of pyrrole, furan, thiophene and pyridine
4.7 Methods of synthesis properties and chemical reactions of Pyrrole, Furan, Thiophene and
Pyridine
4.8 Comparison of basicity of Pyridine, Piperidine and Pyrrole
4.9 Summary
4.10 Terminal Question
4.1 OBJECTIVES
• Know about the most important simple heterocyclic ring systems containing heteroatom
and their systems of nomenclature and numbering.
• Understand and discuss the reactivity and stability of hetero aromatic compounds.
• Study the important synthetic routes and reactivity for five and six member hetero
aromatic compounds.
• Understand the important physical and chemical properties of five and six member hetero
aromatic compounds.
• Know about the applications of these hetero aromatic compounds in the synthesis of
important industrial and pharmaceutical compounds
4.2 INTRODUCTION
Heterocyclic compound is the class of cyclic organic compounds those having at least one hetero
atom (i.e. atom other than carbon) in the cyclic ring system. The most common heteroatoms are
nitrogen (N), oxygen (O) and sulphur (S). Heterocyclic compounds are frequently abundant in
plants and animal products; and they are one of the important constituent of almost one half of
the natural organic compounds known. Alkaloids, natural dyes, drugs, proteins, enzymes etc. are
the some important class of natural heterocyclic compounds. Heterocyclic compounds can be
easily classified based on their electronic structure. Heterocyclic compounds are primarily
classified as saturated and unsaturated. The saturated heterocyclic compounds behave like the
acyclic derivatives with modified steric properties. Piperidine and tetrehydrofuran are the
conventional amines and ethers of this category. However, unsaturated heterocyclic compounds
of 5- and 6- member rings have been studied extensively because of their unstrained nature. The
unstrained unsaturated heterocyclic compounds include Pyridine, Thiophene, Pyrrole, Furan and
their benzo fused derivatives. Quinoline, Isoquinoline, Indole, Benzothiophene, and Benzofuran
are some important example of benzo fused heterocycles. Heterocyclic compounds have a wide
application in pharmaceuticals, agrochemicals and veterinary products. Many heterocyclic
compounds are very useful and essential for human life. Various compounds such as hormones,
alkaloids antibiotic, essential amino acids, hemoglobin, vitamins, dyestuffs and pigments have
heterocyclic structure.
In the present unit, students would be able to learn about the common five and six membered
heterocyclic compounds, such as Pyrrole, Furan, Thiophene, Pyridine and Piperidine etc.
HN O S O NH S
Aziridine Ethylene oxide Thiirane Oxetane Azetidine Thietane
O NH
O
O O NH
O
Tetrahydrofuran 1,2-dioxane 1,4-dioxane Pyrrolidine Piperidine
(THF)
Figure 1. Examples of aliphatic heterocyclic compounds
However, aromatic heterocyclic compounds are analogous of benzene. The aromatic heterocyclic
compounds also follow the Huckel’s rule. According to Huckel’s rule an aromatic compounds
must be cyclic in nature with planar geometry due to conjugate double bonds and must have
(4n+2)π electrons. Examples of aromatic heterocyclic compounds are shown in figure 2.
O NH S O
N
N
H
Furan Pyrrole Thiophene Pyridine Indole Benzofuran
H
N N HN O NH
N
N N
N
Carbazole Quinoline Isoquinoline Imidazole Oxazole Pyrazole
N N N
N N
N
N N
H
Pyridazine Pyrimidine Purine
A hetero cyclic ring may comprise of three or more than three atoms, which may be saturated or
unsaturated. Also heterocyclic ring may contain more than one heteroatom which may be either
similar or different.
Based on the variety of structure, the heterocyclic compounds may also be divided in to three
categories.
1. Five membered heterocyclic compounds: These heterocyclic compounds may be
considered to be derived from benzene by replacing one C=C bond by a hetero atom with
a lone pair of electron. Based on number of hetero atom present in the cyclic ring this
class of heterocyclic compounds may be further subdivided in to following categories.
a). Heterocyclic compounds with one hetero atom: Common examples of this class of
compounds are furan, thiophene and pyrrole (Figure 3).
O NH S
b). Heterocyclic compounds with more than one hetero atom: These hetero atoms may be same
or different. Common examples of this category of heterocyclic compounds are pyrazole,
imidazole, thiazole, oxazole, triazole and tetrazole etc (Figure 4).
NH HN O S HN N HN N
N N N N
N N N
Pyrazole Imidazole Oxazole Thiazole Traizole Tetrazole
N O S
b). Heterocyclic compounds with more than one hetero atom: Common examples of this class of
compounds are pyridazine, pyrimidine, pyrazine etc (Figure 6).
N
N N N
N
N
pyridazine pyrimidine pyrazine
Figure 6. Six member heterocyclic compounds with more than one hetero atom
3. Fused or condensed heterocyclic compounds: This class of compound may consist two
or more fused rings which may be partly carbocyclic and partly heterocyclic, common
examples of this category of heterocyclic compounds are Indole, Quinoine,
Isoquionoline, Cabazole etc; or may be completely heterocyclic, common examples of
this category of heterocyclic compounds are purine, pteridine etc (Figure 7).
H
N N
O
N
H
Indole Benzofuran Carbazole Quinoline
N N N
N N
N N
N N
H
Isoquinoline Purine Pteridine
Figure 7. Fused or condensed heterocyclic compounds
N CH3
Picoline
Heterocyclic compounds were also named on the basis of their characteristic properties. For
example, pyrrole; which is basic in nature; the name of pyrrole was originated from the Greek
word for fiery red because of characteristic colour which the compound gives with pine splint
dipped in hydrochloric acid.
N
H
Pyrrole
Similarly, the name Furfural is given based on it’s source. Furfural means barn oil. Furfural was
isolated from the distillation of barn.
O CHO
Furfural
The trivial nomenclature was the first nomenclature method which has a significant role in the
development of heterocyclic chemistry. However, this system has some disadvantages too. The
trivial system does not give any structural information about the compound. At present just over
60 trivial names survive and recognized by IUPAC system of nomenclature. These recognized
names are, however, significant because they are used as basis for constructing other compounds,
more systematic names for polycyclic compounds and/or their derivatives. Examples of
heterocyclic compounds with recognized trivial names are shown in figure 8.
NH O S NH HN
N N
Pyrrole Furan Thiophene Pyrazole Imidazole
N
O O N N N
N
N N
Oxazole Isooxazole Pyridine Pyridazine Pyrimidine
H
N O N
N N
Pyrazine Pyran Pyrrolizine Indole
H
N N
NH N
N
N N N
N
N N
N
Isoquinoline Quinazoline Pteridine
Following are the important points to be remembered during the systematic nomenclature of
heterocyclic compounds.
1. In this nomenclature the nomenclature of heterocyclic compounds are assigned by
combining ‘prefix’ (that indicate the heteroatom present) with ‘stem’ (that indicate the
ring size as well as the saturation and unsaturation in the ring) and ‘suffixes’. The
common prefixes are shown in Table 1. It should be noted that final ‘a’ is dropped when
prefix is followed by vowel.
2. Nomenclature of heterocyclic compound starts with the heteroatom appears first in the
table 1.
3. If more than two different heteroatoms are present in any heterocyclic compound the
prefixes are listed in order in which they are appear in above table (Table 1).
4. If there are two or more than two hetero atoms of same types are present in a
heterocyclic compound they are indicated by di-, tri- etc.
5. The position of saturated atom is numerically indicated with prefix ‘H-’ as a part of the
name of the ring system. It should be noted that where, there is a choice of numbering,
the indicated position is given the lowest possible number.
6. The size of a monocyclic ring (three to ten membered rings) is indicated by stem. The
common ‘stem’ nomenclature is given in Table 2.
Table 1: Common Prefix for Heteroatoms (arranged in the preferential order)
Some examples of heterocyclic compounds with systematic nomenclature are shown in figure 9.
H
N N O S S
HN N O S
S N
thiepane (azocine
Figure 9. Examples of some heterocyclic compounds with systematic names
4.5 MOLECULAR ORBITAL PICTURE OF HETEROCYCLIC
COMPOUNDS
Molecular orbital theory is widely used to interpret the structure of aromatic and hetero-aromatic
compounds. According to Huckel approximation the electrons in the p-orbitals are treated
separately from those electrons which are involved in the formation of the bonds in the plane of
the ring. The six p-orbitals are combined to give six delocalized π molecular orbitals (3 π
bonding molecular orbitals and 3 antibonding π molecular orbitals). Each of the six π -molecular
orbitals can accommodate a maximum of two electrons. The 3 bonding π -molecular orbitals are
of lower energies than the 3 antibonding π -molecular orbitals. Thus the electrons will be filled in
lower 3 bonding π -molecular orbitals first. We will be discussing here the π -molecular orbitals
of pyrrole and pyridine as model compounds of five and six membered heterocyclic compounds.
NH O S
Pyrrole is the most fundamental member of this family. It is an aromatic compound with all 5
sp2- hybridized atoms. The lone pair of heteroatom (e.g. N in the case of pyrrole) participates in
the delocalization and constitutes an aromatic compound with 4n+2 π electrons (Huckel rule of
aromaticity). The molecular orbital diagram of pyrrole is shown on figure 11.
represents orbital is in the plane of molecule
N
N H
H
Energy
N
N H
H
N
H
If we recall the π -molecular orbital of benzene that we have studied in undergraduate chemistry
course of semester one; where you could see that the π -molecular orbitals of benzene follow the
rule of degeneracy (set of orbitals with same energy, same symmetry and similar orientation).
However, the introduction of heteroatom by replacement of ring carbon leads the formation of
non-degenerated set of π -molecular orbital. For example, we can see from the figure 11, splitting
of the π2 and π 3 levels; the orbital π 2 has a large orbital coefficient on nitrogen (due to more
electro negativity of nitrogen than carbon) and thus lower in energy than π 3. The π 3 molecular
orbital, in which the lone pair of the nitrogen atom lies on the perpendicular plane of the p-
orbitals of ring carbon atoms helps to create two nodal points, hence, do not participate in the
formation of ring current. Thus the nitrogen atom of π 3 has less orbital coefficient that π 2. In the
five membered heterocyclic compounds six- π electron are distributed over five atoms therefore
the carbon atoms of such heterocyclic compounds have more electron density than that of
benzene. Among the five constituting atoms of pyrrole, the nitrogen has maximum electron
density than four carbon atoms this is because of the more electro-negativity of nitrogen.
Similar description may also be made for the other five membered heterocyclic compounds like
Furan and Thiophene.
Energy Figur
N 3 e 12.
2 N
π-
Mole
cular
orbita
N 1
l of
The six p-orbitals are combined together to give six delocalized π -molecular orbitals. Each π -
molecular orbital can contain two electrons. Out of six π -molecular orbitals three are called
bonding π -molecular orbital and three are called antibonding π -molecular orbital. All six π -
electrons are accommodated by three bonding π -molecular orbital. Similar to pyrrole, the π -
molecular orbital of pyridine also have lower energy in comparison to benzene, this is because of
the presence of nitrogen atom in place of a ring carbon. As already discussed in the previous
section that the due to more electro-negativity of nitrogen than carbon the electron density at
nitrogen atom is greater than the carbon, thus nitrogen have comparatively larger orbital
coefficient than carbon, therefore, the π -molecular orbital of pyridine are of lower energy than
that of benzene. Similar to pyrrole, in pyridine also the introduction of heteroatom by
replacement of ring carbon leads the formation of non-degenerated set of π -molecular orbital.
For example, we can see from the figure 12, splitting of the π 2 and π 3 levels; the orbital π 2 has a
large orbital coefficient on nitrogen (due to more electro negativity of nitrogen than carbon) and
thus lower in energy than π 3 (figure 12).
N
H
Pyrrole
3. Pyrrole usually does not explain the simple addition reactions like alkenes under normal
conditions. This is because of the delocalization of lone pair of nitrogen atom through
conjugation. This delocalization provides extra stability to the double bonds of pyrrole.
Also the proposed structure of pyrrole is considered as an aromatic compound since it
follows the Huckel’s aromaticity rules (4n+2 electron rule). The aromatic nature and
extra-stability of pyrrole can also be supported by the formation of its different resonating
structures as shown in below figure. The structure of pyrrole is the resonance hybrid of
all resonating structures.
N N N N N
H H H H H N
H
4. The delocalization of lone pair of nitrogen in pyrrole through conjugation also suggests
that the pyrrole molecule should have planar geometry. This is only possible when the
orbitals of carbon and nitrogen in pyrrole are sp2- hybridized. The three sp2- hybridized
orbitals of nitrogen contain one- one electron in each sp2- hybridized orbital. The
unhybridized p-orbital of nitrogen contains lone pair of electrons. Two sp2- hybridized
orbitals of nitrogen atom forms -bond with two carbon atoms of the ring whereas the
third sp2- hybridized orbital of nitrogen atom forms -bond with hydrogen atom.
Similarly each sp2- hybridized carbon forms two -bonds with neighboring carbon atoms
and one -bond with hydrogen atom. The unhybridized orbitals of each carbon contain
one electron. These unhybridized orbitals of carbon and nitrogen form a delocalized
electron cloud above and below the pentagonal ring of pyrrole. The delocalized electron
cloud is shown in figure 13.
N
H
Figure 13. Delocalized electron cloud above and below the pyrrole ring
O
Furan
3. Like Pyrrole, due to delocalization of one of the lone pair of electron of oxygen in furan,
it also does not explain the fundamental addition reactions like simple alkenes under
normal condition. The proposed structure of furan is also considered as an aromatic
compound since it follows the Huckel’s aromaticity rules (4n+2 electron rule). The
aromatic nature and extra-stability of furan is also supported by the formation of its
different resonating structures as shown in below figure. The structure of furan is the
resonance hybrid of all resonating structures.
O O O O O
O
4. The delocalization of lone pair of oxygen in furan through conjugation also suggests that
the furan molecule should have planar geometry. This is only possible when the orbitals
of carbon and oxygen in furan are sp2- hybridized. The two sp2- hybridized orbitals of
oxygen contain one- one electron in each sp2- hybridized orbital; however, third sp2-
hybridized orbital contains one lone pair of electron. The unhybridized p-orbital of
oxygen contains two electrons. Two sp2- hybridized orbitals of oxygen atom forms π -
bond with two carbon atoms of the ring, whereas the third sp2- hybridized orbital of
oxygen atom accommodate lone pair of electron. Similarly each sp2- hybridized carbon
forms two π -bonds with neighboring atoms and one π -bond with hydrogen atom. The
unhybridized orbitals of each carbon contain one electron. These unhybridized orbitals of
carbon and oxygen form a delocalized electron cloud above and below the pentagonal
ring of furan. The delocalized electron cloud is shown in figure 14.
O
Figure 14. Delocalized electron cloud above and below the furan ring
S
Thiophene
3. Like Pyrrole, due to delocalization of one of the lone pair of electron of oxygen in
thiophene, it also does not explain the fundamental addition reactions like simple alkenes
under normal condition. The proposed structure of thiophene is also considered as an
aromatic compound since it follows the Huckel’s aromaticity rules (4n+2 electron rule).
The aromatic nature and extra-stability of thiophene is also supported by the formation of
its different resonating structures as shown in below figure. The structure of thiophene is
the resonance hybrid of all resonating structures.
S S S S S
S
4. The delocalization of lone pair of sulphur in furan through conjugation also suggests that
the thiophene molecule should have planar geometry. This is only possible when the
orbitals of carbon and sulphur in thiophene are sp2- hybridized. The two sp2- hybridized
orbitals of sulphur contain one- one electron in each sp2- hybridized orbital; however,
third sp2- hybridized orbital contains one lone pair of electron. The unhybridized p-orbital
of sulphur contains two electrons. Two sp2- hybridized orbitals of sulphur atom forms π -
bond with two carbon atoms of the ring, whereas the third sp2- hybridized orbital of
sulphur atom accommodate lone pair of electron. Similarly each sp2- hybridized carbon
forms two π -bonds with neighboring atoms and one π -bond with hydrogen atom. The
unhybridized orbitals of each carbon contain one electron. These unhybridized orbitals of
carbon and sulphur form a delocalized electron cloud above and below the pentagonal
ring of thiophene. The delocalized electron cloud is shown in figure 15.
Figure 15. Delocalized electron cloud above and below the thiophene ring
N
pyridine
This structure is considered to be the resonance hybrid of the following structures.
N N N N N
i. All the carbon, nitrogen and hydrogen atoms lie in the same plane all the carbon and
nitrogen atoms of pyridine are sp2 hybridized.
ii. Each sp2- hybridized carbon forms two π -bonds with neighboring atoms and one -
bond with hydrogen atom.
iii. The unhybridized p-orbital of each carbon atom is involved to form the -bond with
neighboring atoms.
iv. The two of three sp2- hybridized orbitals of nitrogen contain one- one electron in each
sp2- hybridized orbital; however, the third sp2- hybridized orbital of nitrogen contains
lone pair of electron. The unhybridized p orbital of nitrogen contains one electron which
is involved to form π -bond with any of the neighboring carbon atoms.
v. All the carbon-carbon bonds in pyridine are of equal length (i.e. 1.39 Å).
vi. The carbon-nitrogen bonds are also of equal length (1.37 Å).
vii. These properties resists the pyridine from simple addition reaction of C=C double bond.
Since in pyridine there is no true C=C double bond.
viii. The resonating structures represent that the more electron density at C-3, hence
electrophilic substitution in pyridine takes place at C-3.
9. The delocalized electron cloud in pyridine is shown in figure 16.
N
Figure 16. Delocalized electron cloud above and below the pyridine ring
ii. From succinimide: Succinimide when is distilled with Zn dust it reduces the
succinimide to pyrrole.
O
Zn dust
NH NH
O
Succinimide Pyrrole
iii. From Furan: Industrially pyrrole is prepared by passing a mixture of furan and
ammonia over alumina over 400° C.
O + NH3 NH
Furan Pyrrole
iv. Pall-Knorr synthesis: In this method, when a 1,4-diketone is heated with ammonia or a
primary amine it gives the corresponding pyrrole derivatives.
O
OH
H
O + NH3 NH
O -H2O NH NH -H2O
H
Hexane- 2,5-dimethylpyrrole
2,5-dione
E= electrophile
All the electrophilic substitution reactions of pyrrole occur at position C-2 and follow the similar
mechanism as shown above.
a) Acidic Character of Pyrrole: The lone pair of nitrogen usually participates in
resonance and thus makes the pyrrole aromatic. That is the reason, the lone pair of
nitrogen could not be available free to react with a proton.
However, pyrrole can behave as a weak acid. When pyrrole is heated with potassium in n-
heptane as solvent, stable potassium pyrrolide is formed.
K
n-heptane
N N K+
H
Pyrrole Potassium pyrrolide
Potassium pyrrolide when reacts with alkyl halide at 60° C to give N-alkyl pyrrole. The N-alkyl
pyrrole can easily rearrange to C-alkyl pyrrole.
CHCl3 200o C
60o C
CH3
N K+ N N
CH3 H
Potassium pyrrolide 1-Methylpyrrole 2-Methylpyrrole
+ Br2
Br Br
N N
H H
Pyrrole 2,3,4,5-tetrabromopyrrole
O
+ CH3-C-ONO2
NO2
N N
H H
Pyrrole 2-nitropyrrole
iv. Friedel-Crafts Acylation: Reaction of pyrrole with acetic anhydride under heating
condition gives 2-acetylpyrrole.
O O
O
+ CH3-C-O-C-CH3
C-CH3
N N
H H
Pyrrole 2-acetylpyrrole
KOH O
+ CH3Cl
C-H
N N
H H
Pyrrole 2-Formylpyrrole
H2/Ni
473K
N N
H H
Pyrrole Pyrrolidine
[O]
CrO3+H2SO4 O O
N N
H H
Pyrrole Pyrrole-2,5-dione (Malecimide)
ii. From Furfural: Furan is synthesized from furfural which is obtained by acid-hydrolysis
of pentose sugars.
CHO
H+/H2O H2SO4/ ZnO/Cr2O3/
(C5H8O4)n CHOH 3 - CO
- 3H2O CHO
O O
CH2OH
Furan-2-carbaldehyde Furan
Pentose sugar Aldopentose (Furfural)
O P2O5 /
O O
-H2O
Hexane-2,5- 2,5-dimethylfuran
dione
4 3
E+ H H H
- H+
5
2 E
O1 O E O E O E O
E= electrophile
dioxane
+ Br2
0oC
Br
O O
Furan 2-bromofuran
O
+ CH3-C-ONO2
NO2
O O
Furan 2-nitrofuran
O O
Furan Tetrahydrofuran
c) Gattermann Koch Synthesis: When furan is treated with a mixture of HCN and HCl
in the presence of Lewis acid catalyst AlCl3, furfural is obtained as final product.
AlCl3
HCN + HCl HN=CHCl
AlCl3 H2O
+ HN=CHCl
- HCl
CH=NH CHO
O O O
Furan Furan-2-carbaldehyde
(Furfural)
O + O O O
O O
Furan Maleic Anhydride Adduct
ii. Laboratory Method: When sodium succinate is heated with phosphorous sulphide,
thiophene is obtained.
COONa
H2C
+ P2S3 S
H2C
COONa
Sodium succinate Thiophene
O P2S5 /
O S
-H2O
Hexane-2,5- 2,5-dimethylthiophene
dione
4 3
E+ H H H
- H+
5
2 E
S1 S E S E S E S
E= electrophile
dioxane
+ Br2
Br Br
S S
Thiophene 2,5-dibromothiophene
dioxane
+ I2
I
S S
Thiophene 2-Iodothiophene
O
+ CH3-C-ONO2
NO2
S S
Thiophene 2-nitrothiophene
cold
conc. H2SO4
SO3H
S S
Thiophene Thiophene-2-sulfonic acid
S S
Thiophene Tetrahydrothiophene
H3C
N CH3
H3C
2,4,6-trimethylpyridine
iii. From pyrrole: Pyrrole when heated with methylene chloride in presence of sodium
ethoxide, pyridine is formed.
iv. From Picoline: Beta-picoline on oxidation with potassium dichromate and sulphuric
acid gives nicotinic acid, which on decarboxylation with calcium oxide gives
pyridine.
CH3 COOH
[O] CaO/
K2Cr2O7/H + - CO2
N N N
3-Methylpyridine Nicotinic acid Pyridine
(Picoline)
+ HCl
N N
Cl
H
Pyridine Pyridinium Chloride
The basic nature of pyridine is due to the freely available lone pair of electrons in sp2 hybridized
orbital pyridine, which does not participate in the formation of delocalized π -molecular orbital.
Pyridine is less basic in comparison to aliphatic amines whereas, it is more basic than aniline and
pyrrole. This is because the lone pair of electrons in aliphatic amines exists in sp3 hybridized
orbital, however, in case of pyridine the lone pairs of electrons exists in sp2 hybridized orbital.
Electrons are held more tightly by the nucleus in a sp2 hybridized orbital than an sp3 hybridized
orbital. Hence the lone pair of electrons in pyridine is less available for protonation. The less
basicity of pyrrole and aniline can be explained in terms of non-availability of these lone pair of
electrons on nitrogen atom. These lone pair of electrons is involved in the formation of
delocalized π -molecular orbital.
b. Reduction: Under catalytic hydrogenation of pyridine hexahydropyridine is
formed. It is also known as Piperidine.
Ni or Pt
+ 3H2
or Na/C2H5OH
N N
H
Pyridine Piperidine
c. Electrophilic substitution Reactions: Pyridine is also an aromatic compound. It is less
aromatic than benzene and pyrrole. Pyridine usually considered a highly deactivated
aromatic nucleus towards electrophilic substitution reactions. Therefore highly vigorous
reaction conditions should be used for these reactions to take place. The low reactivity of
pyridine towards the electrophilic substitution reactions is due to the following reasons:
➢ The higher electro negativity of nitrogen atom reduces electron density on the
ring, thus deactivate the ring.
➢ Pyridine is highly sensitive to acidic medium; it readily forms pyridinium
cation with a positive charge on nitrogen atom. Similarly, electrophile itself
may also react with pyridine to form corresponding pyridinium ion. This
positive charge on nitrogen atom decreases electron density on nitrogen atom,
consequently, the electron density on ring also decreases.
However, the effect of such deactivation is comparatively lower at position C-3. The
position C-3 is thus, comparatively, the position of highest electron density in pyridine.
+ H E+
N N
H E
Pyridine Pyridinium cation
This is the reason that the pyridine undergoes electrophilic substitution at position C-3.
Pyridine also gives electrophilic substitution like halogenation, nitration and sulphonation only
under drastic conditions. Pyridine does not give Friedel-crafts reaction. Approach of the
electrophile at position C-3 leads the formation of three resonating structures (I, II and III);
similarly, approach of electrophile at position C-2 also leads the formation of three resonating
structures (IV, V and VI). However, out of the three contributing resonating structures for the
intermediate ion resulting from the attack of electrophile at position C-2, structures VI is
considered as an unstable resonating form because in resonating structure VI the more
electronegative nitrogen atom bears a +ve charge. Because of the unstable nature of one of the
resonating structure of the intermediate ion formed during the attack of electrophile at position
C-2 than that of the formed during the attack of electrophile at position C-3, the electrophilic
substitution in pyridine at position C-3 is always favoured. Following mechanism is suggested
for the electrophilic attack at position C-3.
Electrophilic attack at position C-3
H H H E
+ E E E
E
N N N N N
I II III
E+
E E E
N N H N H N H N E
IV V VI
N N
Pyridine 3-Bromopyridine
Nu
Nu Nu Nu
N N H N H N H N Nu
I II III
Nucleophilic attack at position C-3
H H H Nu
Nu Nu Nu Nu
N N N N N
IV V VI
i. Reaction with Sodium amide: Pyridine reacts with sodium amide to give 2-
aminopyridine via nucleophilic substitution.
+ NaNH2 100oC
N N NH2
Pyridine Pyridin-2-amine
+ C6H5Li 100oC
N N C6H 5
Pyridine 2-Phenylpyridine
< <
N N N
H H
Pyrrole Pyridine Piperidine
pKb = 14 pKb = 8.7 pKb = 2.7
The above order of basicity of pyrrole, pyridine and piperidine can be justified in terms of the
structure of these compounds. As we know that the basicity of nitrogen compounds depends
upon the availability of lone pair of electron on nitrogen atom. In pyrrole, the lone pair of
electron on nitrogen atom exists in the sp2 hybridized orbital of nitrogen and participates in the
delocalization, hence does not freely available to cause the basic character of pyrrole. Similar to
pyrrole, the lone pair of electron on nitrogen atom of pyridine also exists in the sp2 hybridized
orbital; however, it does not participate in the delocalization and available freely to cause the
basic character. Although the lone pair of electron on nitrogen atom of pyridine available freely
but due to more electronegative character of sp2 hybridized nitrogen atom (50% s-character) this
lone pair is tightly bonded with nucleus, hence, less available for protonation. However, in
piperidine, the lone pair of electron of nitrogen atom lies in sp3 hybridized orbital of nitrogen.
These electrons are less tightly bonded with nucleus. Therefore, these electrons are readily
available for protonation. Thus, piperidine is the strongest base among the three.
4.9 SUMMARY
• Heterocyclic compounds are those organic cyclic compounds which contains a hetero atom
(N, O, S) as the part of ring.
• A hetero cyclic ring may comprise of three or more than three atoms, which may be
saturated or unsaturated.
• Heterocyclic ring may contain more than one heteroatom which may be either similar or
different.
• Heterocyclic compounds may be aliphatic or aromatic in nature.
• The aliphatic heterocyclic compounds are the cyclic amines, cyclic amides, cyclic ethers
and cyclic thioethers.
• Aliphatic heterocycles those do not contain double bonds are called saturated heterocycles.
• The properties of aliphatic heterocycles are mainly affected by the ring strain.
• Aromatic heterocyclic compounds are analogous of benzene.
• The aromatic heterocyclic compounds also follow the Huckel’s rule (i.e. aromatic
compounds must be cyclic in nature with planar geometry due to conjugate double bonds
and must have (4n+2)π electrons).
• The nomenclature of heterocyclic compounds is divided in to two categories, a) Trivial
method of nomenclature and, b) Systematic method of nomenclature.
• The trivial nomenclature was the first nomenclature method which has a significant role in
the development of heterocyclic chemistry.
• When heterocyclic compounds are named on the basis of their source from which the
compound was obtained. This nomenclature pattern in known as trivial nomenclature.
• The trivial system does not give any structural information about the compound.
• Systematic nomenclature is the most widely used nomenclature system for monocyclic
heterocyclic compounds especially for three to ten membered ring systems.
• The systematic nomenclature gives important structural information.
• The most relevant systematic nomenclature that is recommended by IUPAC for
nomenclature of heterocyclic compounds is the Hantzch-Widmann system of
nomenclature.
• This nomenclature system specifies the nature, position, ring size, number, and types of
heteroatoms present in any heterocyclic compounds.
• Molecular orbital model of heterocyclic compounds reveals that the heterocyclic
compounds have less aromatic character in comparison to benzene and its derivatives.
• Molecular orbital model of heterocyclic compounds also suggested why there is
asymmetrical electron density occurs in heterocyclic compounds.
• Due to less aromatic character then benzene, the rate of electrophilic substitution reactions
of heterocyclic compounds is slower than benzene.
• Pyrrole, furan and thiophene undergo electrophilic substitution at position C-2.
• Pyridine undergoes electrophilic substitution at position C-3.
• Pyridine generally deactivated the aromatic ring towards electrophilic substitution reaction.
• The deactivation of aromatic ring towards electrophilic substitution resulted due to the
electron withdrawing nature of nitrogen atom.
• Due to such deactivation, pyridine also gives nucleophilic substitution reaction.
• Nucleophilic substitution in pyridine ring occurs at position C-2.
• Among the three nitrogenous heterocyclic compounds (i.e. Pyrrole, Pyridine and
Piperidine), Piperidine is the most basic; whereas, pyrrole is the least basic heterocyclic
compound.
4.11 ANSWERS
A1. Heterocyclic compound is the class of cyclic organic compounds those having at least one
hetero atom (i.e. atom other than carbon) in the cyclic ring system. The most common
heteroatoms are nitrogen (N), oxygen (O) and sulphur (S). Heterocyclic compounds are
frequently abundant in plants and animal products; and they are one of the important constituent
of almost one half of the natural organic compounds known. Alkaloids, natural dyes, drugs,
proteins, enzymes etc. are the some important class of natural heterocyclic compounds.
Heterocyclic compounds have a wide application in pharmaceuticals, agrochemicals and
veterinary products. Many heterocyclic compounds are very useful and essential for human life.
Various compounds such as hormones, alkaloids antibiotic, essential amino acids, hemoglobin,
vitamins, dyestuffs and pigments have heterocyclic structure.
A2. The systematic nomenclature is more useful than trivial nomenclature because the
systematic nomenclature gives important structural information. The most relevant system that is
recommended by IUPAC for nomenclature of heterocyclic compounds is the Hantzch-Widmann
system of nomenclature. This nomenclature system specifies the nature, position, ring size,
number, and types of heteroatoms present in any heterocyclic compounds. This systematic
method generally derived the nomenclature using the following syntax;
Name: Prefix + Stem + Suffix
A3. Pyrrole usually does not explain the simple addition reactions like alkenes under normal
conditions. This is because of the delocalization of lone pair of nitrogen atom through
conjugation. This delocalization provides extra stability to the double bonds of pyrrole. Also the
proposed structure of pyrrole is considered as an aromatic compound since it follows the
Huckel’s aromaticity rules (4n+2 electron rule). The aromatic nature and extra-stability of
pyrrole can also be supported by the formation of its different resonating structures as shown in
below figure. The structure of pyrrole is the resonance hybrid of all resonating structures.
N N N N N
H H H H H N
H
1. The delocalization of lone pair of nitrogen in pyrrole through conjugation also suggests
that the pyrrole molecule should have planar geometry. This is only possible when the
orbitals of carbon and nitrogen in pyrrole are sp2- hybridized. The three sp2- hybridized
orbitals of nitrogen contain one- one electron in each sp2- hybridized orbital. The
unhybridized p-orbital of nitrogen contains lone pair of electrons. Two sp2- hybridized
orbitals of nitrogen atom forms π-bond with two carbon atoms of the ring whereas the
third sp2- hybridized orbital of nitrogen atom forms π -bond with hydrogen atom.
Similarly each sp2- hybridized carbon forms two π -bonds with neighboring carbon atoms
and one π -bonds with hydrogen atom. The unhybridized orbitals of each carbon contain
one electron. These unhybridized orbitals of carbon and nitrogen form a delocalized
electron cloud above and below the pentagonal ring of pyrrole. The delocalized electron
cloud is shown in figure.
N
H
A4. As we know that the basicity of nitrogen compounds depends upon the availability of lone
pair of electron on nitrogen atom. In pyrrole, the lone pair of electron on nitrogen atom exists in
the sp2 hybridized orbital of nitrogen and participates in the delocalization, hence does not freely
available to cause the basic character of pyrrole. Similar to pyrrole, the lone pair of electron on
nitrogen atom of pyridine also exists in the sp2 hybridized orbital; however, it does not
participate in the delocalization and available freely to cause the basic character. Therefore,
pyridine is more basic than pyrrole.
A5. Pyrrole undergoes electrophilic substitution at the position C-2. Approach of the electrophile
at position C-2 leads the formation of three resonating structures; however, only two resonating
structures are obtained when the electrophile approaches at position C-3. Thus the intermediate
obtained by the approach of electrophile at position C-2 is more stable than the intermediate
obtained by the approach of electrophile at position C-3. This is the reason that electrophilic
attack occurs at position C-2. Following mechanism is suggested for the electrophilic attack at
position C-2. All the electrophilic substitution reactions of pyrrole occur at position C-2 and
follow the similar mechanism as shown below.
Attack at position C-3:
H H E
4 3
E E
E+ - H+
5 2
N1 N N N
H H H H
E= electrophile
A6. Pyridine generally deactivated the aromatic ring towards electrophilic substitution reaction.
The deactivation of aromatic ring towards electrophilic substitution resulted due to the electron
withdrawing nature of nitrogen atom. Due to such deactivation, pyridine also gives nucleophilic
substitution reaction. Nucleophilic substitution in pyridine ring occurs at position C-2. Approach
of the nucleophilic at position C-2 leads the formation of three resonating structures (I, II and
III); similarly, approach of nucleophilic at position C-3 also leads the formation of three
resonating structures (IV, V and VI). The resonating structures for intermediate resulting from
the attack of nucleophile at position C-2 are more stable than those of position C-3, since more
electronegative nitrogen atom hold –ve charge in one of the resonating structure (III) obtained
from the attack of nucleophile at position C-2. Hence, the nucleophilic substitution in pyridine at
position C-2 is always favored. Following mechanism is suggested for the electrophilic attack at
position C-2.
Nucleophilic attack at position C-2
Nu
Nu Nu Nu
N N H N H N H N Nu
I II III
Nucleophilic attack at position C-3
H H H Nu
Nu Nu Nu Nu
N N N N N
IV V VI
Bibliography:
1. “Heterocyclic Chemistry” by Raj K. Bansal 5th Edn, New Age International Publisher,
ISBN 978-81-224-3143-8.
2. “Heterocyclic Chemistry” 5th Edn. by J. A. Joule, K. Mills and G. F. Smith, Wiley
International Publications, ISBN: 978-1-4051-3300-5.
3. “Heterocyclic Chemistry” (3rd Edition) by Thomas. L. Gilchrist, Prentice Hall
Publication, ISBN 978-0-5822-7843-1.
4. “Organic Chemistry” Vol. 1 by I L Finar, Published by Pearson Education; ISBN 10:
8177585428.
5. “Organic Chemistry” by T. W. Graham Solomons, Published by John Wiley; ISBN-10:
1118133579.
UNIT 5: HETEROCYCLIC COMPOUNDS- II
CONTENTS
5.1 Objectives
5.2 Introduction
5.3 Preparation and reactions of indole, quinoline and isoquinoline
5.3.1 Indole
5.3.2 Quinoline
5.3.3 Isoquinoline
5.4 Summary
5.5 Terminal Question
5.6 Answers
5.7 Bibliography
5.1 OBJECTIVES
In this unit learner will be able to
• Know about the most important condensed heterocyclic compounds containing five and
six membered fused rings.
• Understand and discuss the reactivity and stability of such bicyclic hetero aromatic
compounds.
• Study the important synthetic routes and reactivity for five and six membered benzo
fused hetero aromatic compounds.
• Understand the important physical and chemical properties of five and six membered
benzo fused hetero aromatic compounds.
• Know about the applications of these five and six membered benzo fused hetero aromatic
compounds in the synthesis of important industrial and pharmaceutical compounds.
5.2 INTRODUCTION
In unit 4 we have discussed that the heterocyclic compound is the class of cyclic organic
compounds those having at least one hetero atom (i.e. atom other than carbon) in the cyclic ring
system. The most common heteroatoms are nitrogen (N), oxygen (O) and sulphur (S).
Heterocyclic compounds are frequently abundant in plants and animal products; and they are one
of the important constituent of almost one half of the natural organic compounds known.
Alkaloids, natural dyes, drugs, proteins, enzymes etc. are the some important class of natural
heterocyclic compounds. Heterocyclic compounds can be easily classified based on their
electronic structure. Heterocyclic compounds are primarily classified as saturated and
unsaturated. The saturated heterocyclic compounds behave like the acyclic derivatives with
modified steric properties. Piperidine and tetrehydrofuran are the conventional amines and ethers
of this category. However, unsaturated heterocyclic compounds of 5- and 6- member rings have
been studied extensively because of their unstrained nature. The unstrained unsaturated
heterocyclic compounds include Pyridine, Thiophene, Pyrrole, Furan and their benzo fused
derivatives.
Heterocyclic rings systems that are formally derived by fusion with other rings, either
carbocyclic or heterocyclic, have a variety of common and systematic names. For example, with
the benzo-fused unsaturated nitrogen heterocycles, pyrrole provides Indole or isoindole
depending on the orientation. Various other important examples of benzofused heterocyclic
compounds are Quinoline, Isoquinoline, Benzothiophene, Benzazepine, Dibenzoazepine
Carbazole, Acridine, and Benzofuran. Figure 1 shows the structural representation of various
important 5 and 6 membered benzofused heterocyclic compounds.
O S N
N
HN
N
H
Indole Benzofuran Benzothiophene Isoindole Quinoline Isoquinoline
H H
N N
N
HN
Benzoazepine Carbazole Dibenzoazepine Acridine
Figure 1: Examples of various important benzo fused heterocyclic compounds
In the present unit, students would be able to learn about the most important five and six
membered benzo fused heterocyclic compounds, such as Indole, Quinoline and Isoquinoline.
Structure of Indole: The IUPAC name of Indole is 1H-benzo[b] pyrrole, it is being the b-
face benzo-fused isomer. The atoms are numbered as shown in below structure. The numbering
begins from the Nitrogen atom and going counter clock wise around the two condensed rings.
4
3a 3
5
2
6 1
7a N
7 H
All the ring atoms in Indole are sp2 hybridized. The sp2 orbitals of all carbon and nitrogen atom
overlap with each other and also with the s orbitals of hydrogen to form C-C, C-N, C-H and N-H
σ bonds. Each ring atom also possesses a p orbital. These are perpendicular to the plane of the
ring. Lateral overlap of these p-orbitals produce a π molecular orbital containing 10 electrons.
Indole is an aromatic compound since it follows the Huckel’s rule (i.e. 4n+2π electron rule) for
n=2. Indole is a resonance hybrid of several canonical forms. The different possible canonical
forms of Indole are shown in Figure 2. Structures IV, V and VI involve the formation of a non-
benzenoid system in which the aromaticity of benzene ring dose not retained. Hence, these
structures contribute less in the resonance.
N N N
H H H
I II III
N N N
H H H
VI V IV
Synthesis or preparation of Indole: There are different methods available for the
synthesis of Indole and its derivatives. These methods differ in their range of applicability.
However, a number of general methods are also known in which the pyrrole ring formed through
the ring closure reactions. The important methods for the synthesis of Indole are discussed
below.
1. The Fisher-Indole synthesis: This is the most widely used method for the synthesis
of Indole. It involves an acid (Lewis acid) catalyzed rearrangement of a phenylhydrazone
of an aldehyde or ketone, with the elimination of a molecule of ammonia. The
conventional catalysts used in this process are zinc chloride, polyphosphoric acid or a
Lewis acid (BF3). Synthesis of 2-methyl indole can be achieved by taking the
phenylhydrazone of acetone. The reaction is as shown below.
H
H3C CH3 H2C CH3 C CH3
CH3
N NH NH2 - NH3 N
N N NH2 H
H H
2-methyl-1H-indole
Mechanism: Fisher–Indole synthesis is supposed to take place through the acid catalyzed
rearrangement of the tautomeric form of the starting phenylhydrazone as shown below.
H H2 H H
H3C CH3 H2C CH3 C CH3 CH3
H+
N NH NH2 N
N N NH NH2
H H
H
- NH3
CH3
N
H
2. The Madelung Synthesis: This involves the cyclic dehydration of an acyl o-toludine in
presence of a strong base and at high temperature. Indole itself can be prepared by this
method. 2-alkylindole can be synthesized by the cyclodehydration of o-acyl aminotoluene
by treatment with strong base such as potassium tertiary butoxide or sodamide. The
reaction is shown as below.
CH3
O K+t-BuO-
N H N
H H
N-o-tolylformamide Indole
3. The Bischler’s synthesis: This method involves the reaction of an aryl amine and α -
halooketone or α-haloaldehyde in presence of zinc chloride under thermal or heating
condition. The reaction is shown as follow.
CH3
O CH3
2N HCl
+ CH3
reflux
NH2 N
Br CH3 H
aniline 3-bromobutan-2-one 2,3-dimethyl-Indole
Mechanism: The mechanism of Bischler’s Indole synthesis involves the following steps.
Reaction of aniline with α-bromoketone (3-Bromo-2-butanone) in presence of acid under
reflux condition gives the condensed product with elimination of HBr molecule. Which
on thermal cyclization and subsequent aromatization leads the formation of 2,3-dimethyl
Indole.
H OH
O CH3
O CH3 CH3
+
-HBr CH3
NH2 Br CH3 N CH3 N H
H H
Tautomerization
CH3 OH
CH3
CH3 - H2O CH3
N N H
H H
4. The Reissert Synthesis: This method also provides a very simple and convenient
procedure for the synthesis of Indole and its derivatives. This method involves the base
catalyzed condensation of o-nitrotoluene with oxalic acid ethyl ester (diethyl oxalate) in
presence of strong base like sodium ethoxide. This condensation leads the formation of o-
nitro-phenylpyruvate which on hydrolysis gives the corresponding acid. The resultant
acid on reductive cyclization in presence of Zn/CH3COOH yields the Indole. The
reaction is shown as follows
CH3
COOC2H5 1. C2H5O- Na+
+
COOC2H5 2. H+/H2O
NO2 3. Zn/CH3COOH N
H
o-Nitrotoluene diethyl oxalate Indole
Mechanism: o-Nitrotoluene on reaction with sodium ethoxide produces a carbanion
which on condensation with diethyl oxalate yields the o-nitro-phenylpyruvate. The acidic
hydrolysis converts the o-nitro-phenylpyruvate in to corresponding acid. The reductive
cyclization followed by the decarboxylation gives the formation of Indole.
C2H5O H2 O-
O C OC2H5
CH3 CH2
C2H5O- Na+
OC2H5
NO2 NO2
O OC2H5 NO2 O
- C2H5OH
H2
C O
Zn/CH3COOH
COOH
- CO2 OC2H5
N N NO2O
H H
E H E E
H
E+ - H+
H H
N N N
H H H N
H
H
E+ E
- H+
E
N H
H N N
H H
The intermediate of the attack at C3 is stabilized by delocalization of the positive charge.
However, no delocalization is possible in the intermediate derived from attack at C 2 position
without disrupting the aromaticity of the six membered rings. The common electrophilic
substitution reactions of Indole are discussed as follow.
Dioxane
+ Br2
0°C
N N
H H
+ C2H5ONO2
0°C
N N
H H
3. Sulphonation: Sulphonation of Indole is carried out only under milder conditions using
pyridine-sulphur trioxide complex in order to minimize the acidity of the reagent.
SO3H
pyridine
+ SO3
N N
H H
4. Friedel crafts alkylation: Indole undergoes alkylation at C3 position with alkyl iodide in
N,N-dimethyl formamide (DMF) or dimethyl sulphoxide (DMSO) as solvent.
CH3
DMF or DMSO
+ CH3I
N N
H H
N N
N NCl
+
- HCl
N N
H H
6. Reimer Tiemann formylation: Indole, like other aromatic compounds, reacts with
Chloroform (CHCl3) in presence of alkali to give formylated product at C3 position. This
reaction proceeds via carbine intermediate. In general two products are obtained in this
reaction, first, the C3 formylated product (Indole-3-cabaldehyde) and second, the
rearranged product (3-Chloroquinoline).
CHO
Cl
NaOH
+ CHCl3 +
N N N
H H
Indole-3-carbaldehyde 3-Chloroquinoline
5.3.2 QUINOLINE
Quinoline is a heterocyclic aromatic organic compound with the chemical formula C9H7N. It is a
colorless hygroscopic liquid with a strong odor. It is a bicyclic heterocycle having a benzene ring
fused with a pyridine ring at 2, 3-positions. It is also called 1-azanaphthalene or
benzo[b]pyridine. Quinoline was first extracted from coal tar in 1834 by German chemist
Friedlieb Ferdinand Runge; he called quinoline leukol ("white oil" in Greek). Coal tar remains
the principal source of commercial quinoline. In 1842, French chemist Charles Gerhardt obtained
a compound by dry distilling quinine, strychnine, or cinchonine with potassium hydroxide; he
called the compound Chinoilin or Chinolein. Runge's and Gephardt's compounds seemed to be
distinct isomers because they reacted differently. However, the German chemist August
Hoffmann eventually recognized that the differences in behaviors were due to the presence of
contaminants and that the two compounds were actually identical. Like other nitrogen
heterocyclic compounds, such as pyridine derivatives, quinoline is often reported as an
environmental contaminant associated with facilities processing oil shale or coal, and has also
been found at legacy wood treatment sites. Owing to its relatively high solubility in water
quinoline has significant potential for mobility in the environment, which may promote water
contamination. Quinoline is readily degradable by certain microorganisms, such as Rhodococcus
species Strain Q1, which was isolated from soil and paper mill sludge. Quinolines are present in
small amounts in crude oil within the virgin diesel fraction. It can be removed by the process
called hydrodenitrification. Quinoline is only slightly soluble in cold water but dissolves readily
in hot water and most organic solvents. Quinoline itself has few applications, but many of its
derivatives are useful in diverse applications. A prominent example is quinine, an alkaloid found
in plants. 4-Hydroxy-2-alkylquinolines (HAQs) are involved in antibiotic resistance.
Structure of Quinoline: The IUPAC name of quinoline is benzo[b] pyridine, it is being the
b-face benzo-fused isomer. The atoms are numbered as shown in below structure. The
numbering begins from the Nitrogen atom and going counter clock wise around the two
condensed rings. The structure of quinoline is shown as follow.
5 4
4a
6 3
7 2
8a N
8 1
Quinoline
All the ring atoms in Quinoline are sp2 hybridized. The sp2 orbitals of all carbon and nitrogen
atom overlap with each other and also with the s orbitals of hydrogen to form C-C, C-N, and C-H
π bonds. Each ring atom also possesses a p orbital. These p orbitals are perpendicular to the
plane of the ring. Lateral overlap of these p-orbitals produce a π molecular orbital containing 10
electrons. Quinoline is an aromatic compound since it follows the Huckel’s rule (i.e. 4n+2 π
electron rule) for n=2. Unlike Indole, the lone pair of nitrogen of quinoline does not participate in
the delocalization. Quinoline is a resonance hybrid of several canonical forms as shown below.
N N N N
etc
N N N
Synthesis or preparation of Quinoline: There are different methods available for the
synthesis of quinoline and its derivatives. These methods may differ in their range of
applicability. However, a number of general well known methods have been used for the
preparation of quinoline. The important methods for the synthesis of quinoline are discussed
below.
1. The Skraup synthesis: This is one of the most important methods for the preparation of
quinoline. In this method the aniline and its derivatives having vacant ortho position is when
heated with glycerol, concentrated H2SO4 and an oxidizing agent the resultant product is
obtained as quinoline or its derivatives. The nitrobenzene is generally used as mild oxidizing
agent in Skraup synthesis. Glycerol when heated with concentrated H2SO4 it gives the
acroline after dehydration. Condensation of acroline thus obtained with aniline or its
derivatives followed by oxidation gives the quinoline. The reaction is shown as follow.
OH
+ Conc. H2SO4
OH
C6H5NO2 ,
NH2 OH N
Aniline Propane-1,2,3-triol Quinoline
(Glycerol)
Mechanism: The step wise mechanism of Skraup synthesis of quinoline is given as follow.
OH O
Conc. H2SO4
OH H
OH
O
H OH
O H
H +
H
+
H
NH2 - H+
N N
H H
H OH
H
C6H5NO2
Oxidant - H2O
N N N
H H
3. The Dobner-Miller Synthesis: This is a modified form of the Skraup synthesis. In this
reaction the simple aldehydes and ketones act as precursor of α, β-unsaturated carbonyl
compounds. The reaction follows the similar reaction course as in the Skraup synthesis to
produce derivatives of quinoline. When acetaldehyde is used as precursor of α, β -
unsaturated carbonyl compound 2-methylquinoline is formed. The reaction mechanism is
shown as follow.
O O
H3O
H3C H 1. Aldol condensation H3C H
2. - H2O
H
O
[O]
+ C6H5N=CHCH3
NH2 N CH3 N CH3
CH3 H
PHYSICAL PROPERTIES OF QUINOLINE: Quinoline is colourless hygroscopic
liquid. Its boiling point is 237 °C. It has a characteristic smell similar to that of pyridine. On
exposure to air quinoline turns in to yellow coloured. It is miscible in organic solvents. Quinoline
is highly aromatic in nature and it has resonance energy 47.3 kcal/mole. Quinoline is a weak base
having pKa 4.94. The basicity of quinoline is intermediate between aniline (pKa 4.58) and
pyridine (pKa 5.17).
HCl
Cl
N N
H
b. Reaction with methyl iodide:
CH3I
I
N N
CH3
2. Electrophilic substitution: Out of the two fused rings in quinoline, the carbocyclic
(benzene) ring is relatively more electron rich and resembles benzene ring while the nitrogen
containing ring (less electron rich) resembles with pyridine ring. Therefore the electrophilic
substitution in quinoline takes place more readily at benzene ring (at position 5 and 8 of
benzene ring) rather than the pyridine ring. Thus if both the positions in benzene ring are
vacant than mixture of substituted product is obtained. The general mechanism of
electrophilic substitution on quinoline is shown below.
a. At position 5
E
H E H E
E+ +
N N N N
b. At position 8
E+ +
N N N N
H E H E
E
Br2/Ag2SO4
+
H2SO4
N N N
Br
Quinoline 5-Bromoquinoline 8-Bromoquinoline
ii. Nitration: Quinoline can undergo nitration by reacting with the well known
nitrating agent (Conc. H2SO4 + conc. HNO3). Nitration of quinoline occurs at position 5
and 8.
NO2
conc.H2SO4
~ 600 K +
N N
N
SO3H
Quinoline Quinoline-5-sulphonic Quinoline-8-sulphonic
acid acid
iv. Oxidation: In presence of KMnO4 quinoline get oxidized to pyridine-2,3-
dicarboxylic acid which on decarboxylation gives nicotinic acid.
HOOC HOOC
KMnO4 (aq)
373 K - CO2
N HOOC N N
Quinoline Pyridine-2,3-dicarboxylic acid Nicotinic acid
NaNH2
Liq. NH3
N N NH2
Quinoline 2-Aminoquinoline
7 N2
8a
8 1
Isoquinoline
Pd P2O5
160 C
N N , -H2O N
HO
Isoquinoline
H
OC2H5
+ H2N H+
- H2O N N
CHO OC2H5
Benzaldehyde 2,2-diethoxyethanamine
H OC2H5
H2SO4
C2H5OH +
N N
Isoquinoline
etc
N N N
The pKa of Isoquinoline is 5.14 in compare to quinoline (pKa 4.94). It gets protonated to form
salts upon treatment with strong acids, such as HCl. It forms adducts with Lewis acids, such as
BF3.
1. Basicity: Isoquinoline is moderately basic compound. It reacts with protic acid to form
salts, and with alkyl halides to form quaternary ammonium salt.
HCl CH3Cl
Cl Cl
NH N NCH3
Br2/Ag2SO4
+
N H2SO4 N N
Br
Isoquinoline 5-Bromoisoquinoline 8-Bromoisoquinoline
(major)
ii. Nitration: Isoquinoline can undergo nitration by reacting with the well known
nitrating agent (Conc. H2SO4 + conc. HNO3). Nitration of Isoquinoline occurs
preferentially at position 5; small amount of product is also formed with substitution at
position 8.
NO2
NO2
Isoquinoline 5-Nitroisoquinoline 8-Nitroisoquinoline
(major)
iii. Sulphonation: In presence of Conc. H2SO4 at high temperature (~600K)
sulphonation of Isoquinoline takes place. Like nitration or bromination, the
sulphonation of Isoquinoline occurs preferentially at position 5; small amount of
product is also formed with substitution at position 8.
SO3H
conc.H2SO4
~ 600 K + N
N N
SO3H
Isoquinoline Isoquinoline-5- Isoquinoline-8-
sulphonic acid sulphonic acid
(major)
NaNH2
N Liq. NH3 N
NH2
Isoquinoline 1-Aminoisoquinoline
1. Isoquinoline and its derivatives are used in the manufacture of dyes, paints, insecticides,
disinfectants, anesthetics, antihypertension agents and antifungal agents.
2. It is also used as a solvent for the extraction of resins and terpenes, and as a corrosion
inhibitor.
5.4 SUMMARY
• This unit comprises the detail study of three important bicyclic fused heterocyclic
compounds namely Indole, Quinoline and Isoquinoline.
• Indole is an aromatic heterocyclic organic compound with formula C8H7N.
• The name Indole is a combined name of the words indigo and oleum, since Indole was
first isolated by treatment of the indigo dye with oleum.
• Indole is widely distributed in the natural environment.
• Indole is found in coal tar and in essential oils (Jesamine oil, orange oil) of many plants.
• The IUPAC name of Indole is 1H-benzo[b] pyrrole, it is being the b-face benzo-fused
isomer.
• All the ring atoms in Indole are sp2 hybridized.
• Indole is an aromatic compound since it follows the Huckel’s rule (i.e. 4n+2π electron
rule) for n=2.
• The pure form of Indole has very pleasant smell and this is the reason it is used as a
perfumery base.
• Indole is a π-excessive aromatic heterocycles with ten π-electrons. Indole is an aromatic
compound.
• Indole also gives the electrophilic substitution (the characteristic reactions of aromatic
compounds).
• Electrophilic substitution in Indole takes place preferentially at C3.
• Indole and its derivatives are being extensively used in medicinal and pharmaceutical
industry.
• Quinoline is a heterocyclic aromatic organic compound with the chemical formula
C9H7N.
• It is also called 1-azanaphthalene or benzo[b]pyridine.
• Quinoline was first extracted from coal tar in 1834 by German chemist Friedlieb
Ferdinand Runge.
• All the ring atoms in Quinoline are sp2 hybridized.
• Quinoline is an aromatic compound since it follows the Huckel’s rule (i.e. 4n+2π electron
rule) for n=2.
• Unlike Indole, the lone pair of nitrogen of quinoline does not participate in the
delocalization.
• Quinoline also gives the electrophilic substitution (the characteristic reactions of aromatic
compounds).
• The electrophilic substitution in quinoline takes place more readily at benzene ring (at
position 5 and 8 of benzene ring) rather than the pyridine ring.
• Quinoline and its derivatives are being extensively used in medicinal and pharmaceutical
industry.
• Isoquinoline is a heterocyclic aromatic organic compound.
• It is a structural isomer of quinoline.
• It was first isolated by Hoogewerff and Drop from the quinoline fraction of coal tar in
1885.
• It is called 2-azanaphthalene or benzo[b]pyridine.
• Isoquinoline is an aromatic compound since it follows the Huckel’s rule (i.e. 4n+2π
electron rule) for n=2.
• Isoquinoline also gives the electrophilic substitution (the characteristic reactions of
aromatic compounds).
• Electrophilic substitution on Isoquinoline takes place more preferentially at position 5
however small amount of substitution also occurs at position 8.
• Isoquinoline and its derivatives are used in the manufacture of dyes, paints, insecticides,
disinfectants, anesthetics, antihypertension agents and antifungal agents.
• It is also used as a solvent for the extraction of resins and terpenes, and as a corrosion
inhibitor.
All the ring atoms in Indole are sp2 hybridized. The sp2 orbitals of all carbon and nitrogen
atom overlap with each other and also with the s orbitals of hydrogen to form C-C, C-N,
C-H and N-H bonds. Each ring atom also possesses a p orbital. These are
perpendicular to the plane of the ring. Lateral overlap of these p-orbitals produce a π
molecular orbital containing 10 electrons. Indole is an aromatic compound since it
follows the Huckel’s rule (i.e. 4n+2π π electron rule) for n=2. Indole is a resonance
hybrid of several canonical forms. The different possible canonical forms of Indole are
shown in Figure 2. Structures IV, V and VI involve the formation of a non-benzenoid
system in which the aromaticity of benzene ring dose not retained. Hence, these
structures contribute less in the resonance.
N N N
H H H
I II III
N N N
H H H
VI V IV
H H2 H H
H3C CH3 H2C CH3 C CH3 CH3
H+
N NH NH2 N
N N NH NH2
H H
H
- NH3
CH3
N
H
E E E
H H
E+ - H+
H H
N N N
H H H N
H
H
E + E
- H+
E
N H
H N N
H H
7 2
N 8a
8 1
Quinoline
All the ring atoms in Quinoline are sp2 hybridized. The sp2 orbitals of all carbon and
nitrogen atom overlap with each other and also with the s orbitals of hydrogen to form C-
C, C-N, and C-H π bonds. Each ring atom also possesses a p orbital. These p orbitals are
perpendicular to the plane of the ring. Lateral overlap of these p-orbitals produce a π
molecular orbital containing 10 π electrons. Quinoline is an aromatic compound since it
follows the Huckel’s rule (i.e. 4n+2π electron rule) for n=2. Unlike Indole, the lone pair
of nitrogen of quinoline does not participate in the delocalization. Quinoline is a
resonance hybrid of several canonical forms as shown below.
N N N N
etc
N N N
6. The Skraup synthesis: This is one of the most important methods for the preparation of
quinoline. In this method the aniline and its derivatives having vacant ortho position is
when heated with glycerol, concentrated H2SO4 and an oxidizing agent the resultant
product is obtained as quinoline or its derivatives. The nitrobenzene is generally used as
mild oxidizing agent in Skraup synthesis. Glycerol when heated with concentrated H2SO4
it gives the acroline after dehydration. Condensation of acroline thus obtained with
aniline or its derivatives followed by oxidation gives the quinoline. The reaction is shown
as follow.
OH
+ Conc. H2SO4
OH
C6H5NO2 ,
NH2 OH N
Aniline Propane-1,2,3-triol Quinoline
(Glycerol)
Mechanism: The step wise mechanism of Skraup synthesis of quinoline is given as
follow.
OH O
Conc. H2SO4
OH H
OH
O
H OH
O H
H +
H
+
H
NH2 - H+
N N
H H
H OH
H
C6H5NO2
Oxidant - H2O
N N N
H H
7. The Bischler Napieralski synthesis: This synthesis was first suggested by the Bischler
and Napieralski and has been subjected to a number of improvements later on. This
method involves the cyclodehydration of an acyl derivative of B-phenylethylamine to
give 3,4-dihydroisoquinoline, in the presence of Lewis acids such as polyphosphoric acid,
zinc chloride or phosphorous pentoxide. The 3,4-dihydroisoquinoline is then
dehydrogenated by Pd at 160 °C to Isoquinoline. It must be noted that the yields of this
reaction are excellent if electron donating groups are present on benzene ring however if
the electron withdrawing groups are present on benzene ring the yields are very poor.
This is because of the electrophilic ring closure nature of the ring.
O
+ O
NH2 H Cl HN H NH
O
Cl
2- H
Phenylethylamine formyl chloride N-phenethylformamide
Pd P2O5
160 C
N N , -H2O N
HO
Isoquinoline
H
5.7 BIBLIOGRAPHY
6. “Heterocyclic Chemistry” by Raj K. Bansal 5th Edn, New Age International Publisher,
ISBN 978-81-224-3143-8.
7. “Heterocyclic Chemistry” 5th Edn. by J. A. Joule, K. Mills and G. F. Smith, Wiley
International Publications, ISBN: 978-1-4051-3300-5.
8. “Heterocyclic Chemistry” (3rd Edition) by Thomas. L. Gilchrist, Prentice Hall
Publication, ISBN 978-0-5822-7843-1.
9. “Organic Chemistry” Vol. 1 by I L Finar, Published by Pearson Education; ISBN 10:
8177585428.
10. “Organic Chemistry” by T. W. Graham Solomons, Published by John Wiley; ISBN-10:
1118133579.
UNIT WRITER- Dr. Girdhar Joshi, Depatment of Chemistry P.G. College ,Gopeshwar