Pro10-03 Ref of Lab Test Backup Plan SOP

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Author: Munyaradzi P.

Mangwendeza Document Number: Pro10-03


Effective (or Post) Date: Unknown
Document Origin Company: BHHRL
BHHRL, Botswana SMILE Approved by: Penny Stevens
Reviewed by Heidi Hanes Review Date 25 February 2020
pSMILE Comments: This document is provided as an example only. It must be revised to accurately reflect
your lab’s specific processes and/or specific protocol requirements. Users are encouraged to ensure
compliance with local laws and study protocol policies when considering the application of this document.
If you have any questions contact SMILE.

Title:
Document No.:
BOTSWANA-HARVARD Standard Operating Procedure BHHRL/001PR04
HIV REFERENCE
LABORATORY
(BHHRL) Referral of Laboratory Testing Version : 1

Tel: +267 3902671;


Fax: +267 3901284

Referral of Laboratory Testing

Name, Title Signature, Date


Prepared By:
Munyaradzi P. Mangwendeza, Quality Manager

Name, Title Signature, Date


Approved By:

Review Date Revision Date Signature, Date

Annual Review

Location: Copy Number: Location: Copy Number


Master file 1
Director – 2
Distributed To: Dr. Musonda
Director – 3
Dr. Mine
Lab Manager 4
Lab Co-ordinator 5

Copy Number: _________

_______________________________________________________________________________________________
Effective Date: 01/03/2008 Page 2 of 13
Confidential Controlled Document
Document No.:
BOTSWANA-HARVARD Standard Operating Procedure BHHRL/001PR04
HIV REFERENCE
LABORATORY
(BHHRL) Referral of Laboratory Testing Version : 1

Tel: +267 3902671;


Fax: +267 3901284

1. General Policy

1.1. It the policy of BHHRL that any work that needs to be referred, in-house or to
external laboratories, for whatever reason is placed with competent referral
laboratories or back-up instruments that are on the Back-up Plan List and are in
compliance with this Quality Management System and requirements of ISO/IEC
17025:2005 or ISO/IEC 15189 International Standards and other regulatory
agency requirements.
1.2. Referral laboratories are evaluated, selected and monitored by the management
of BHHRL except in cases where the client or regulatory agency specifies which
subcontractor is to be used.
1.3. All method and instrument validations and comparisons are performed before
work is placed with a referral laboratory or with a back up instrument.

2. Purpose
2.1. The purpose of this procedure is to ensure that the use of back-up
instruments/methods and the use of referral laboratories is done in a standard
way that does not compromise the Quality of BHHRL service to its clients.

3. Scope
3.1. This procedure covers the entire test schedule of BHHRL and refers to any
occasion that may require the use of a back up system or referral of test work.

4. Responsibilities
4.1. Quality Manager
4.1.1. Responsible for the evaluation and monitoring of referral laboratories.
4.1.2. Method and instrument validation and comparison of referral laboratories
instruments and BHHRL instruments.
4.1.3. Performance comparison between primary and back-up instruments at
BHHRL.

4.2. Lab Manager


4.2.1. Selection of the referral laboratories to use when the need arises.
4.2.2. Approval of the use of referral laboratories or changing equipment used to
the back-up machinery as required.
4.2.3. Identify all tests that require the use of referral laboratories.
4.2.4. Before work can be referred, the Lab Manger shall draw up, and supply
referral lab with, conditions of service regarding work being referred.

_______________________________________________________________________________________________
Effective Date: 01/03/2008 Page 3 of 13
Confidential Controlled Document
Document No.:
BOTSWANA-HARVARD Standard Operating Procedure BHHRL/001PR04
HIV REFERENCE
LABORATORY
(BHHRL) Referral of Laboratory Testing Version : 1

Tel: +267 3902671;


Fax: +267 3901284

4.3. All staff


4.3.1. Ensure that they report all malfunctioning equipment to the Lab Manager
by filling out a corrective action and problem report form.

4.4. Referral Laboratories


4.4.1. Ensure that they fulfill BHHRL conditions of service and requirements for
referred work.
5. Procedures
5.1. Evaluation of Referral Laboratories
5.1.1. All referral laboratories shall be evaluated before they can be short listed
for selection.
5.1.2. The evaluation form document number BHHRL/001FR026 shall be used
in the collection of information from potential referral laboratories during
the first phase of the evaluation process.
5.1.3. The second phase of the evaluation process shall involve method and
instrument performance comparison between the referral lab and BHHRL.

5.2. Selection
5.2.1. Once a method and instrument performance comparison is accepted, the
laboratory can then be selected for use as a referral lab depending on other
factors such as cost and this is the responsibility of the Laboratory Manager.
5.2.2. Reasons for selections shall be fully documented.

5.3. Monitoring
5.3.1. The referral laboratory shall be subjected to constant monitoring for
continued compliance to requirements.
5.3.2. This shall include bi-annual instrument comparison studies and annual
initial evaluation process, EQA reports analysis, IQC reports analysis and
Instrument performance checks.

5.4. Instrument Comparison


5.4.1. Instrument comparison studies should be done to ensure results from
referral laboratory instruments and BHHRL instruments agree. This should
be done biannually and should follow the procedures laid down in the SOP
on Method and Instrument Validation.
5.4.2. The same should be done for BHHRL back-up systems.
5.4.3. All maintenance checks should be performed to the back up system.

_______________________________________________________________________________________________
Effective Date: 01/03/2008 Page 4 of 13
Confidential Controlled Document
Document No.:
BOTSWANA-HARVARD Standard Operating Procedure BHHRL/001PR04
HIV REFERENCE
LABORATORY
(BHHRL) Referral of Laboratory Testing Version : 1

Tel: +267 3902671;


Fax: +267 3901284

5.5. Using Back up Measures for Testing:


5.5.1. Fill in the CAPR form when the non-conformity has been identified.
5.5.2. Send CAPR form to the Laboratory Manager for assessment of the
problem
5.5.3. Lab Manager approves the use of back up instrument or referral
laboratory.
5.5.4. Notify appropriate personnel, e.g. at referral lab that u will be sending
samples, Lab staff to prepare the back up instruments e.t.c
5.5.5. Send samples for testing ensuring that specimen integrity is maintained
through the proper transport procedures.
5.5.6. Evaluate results all result reports obtained from back up instruments or
referral labs to ensure they conform to requirements.
5.5.7. When corrective actions have been implemented and evaluated to have
been effective, the original testing system can then be put back in place for
normal operations to resume.

6. Results reporting
6.1. All final reports sent to clients shall state that backup system or referral
laboratory was used for testing the samples. This can be achieved via the use of
memos or indicating on the reports.
6.2. Network personnel (ACTG) should be notified when testing has moved to back-
up systems

7. Quality Assurance and Quality Control


7.1. Thorough evaluation process
7.2. Thorough monitoring of selected referral labs or system
7.3. Appropriate documentation and record keeping

8. Records
8.1. Method and Instrument Validation and Comparison Records
8.2. Back-up Plan list
8.3. Corrective action and problem report forms
8.4. Evaluation and Selection Criteria Reports.
8.5. Conditions of Service for referred work

9. Co-applicable documents
9.1. Method and Instrument Validation BHHRL/001PR018
9.2. Control of no-conforming test work BHHRL/001PR07
9.3. Sample collection and transport BHHRL/002PR02

_______________________________________________________________________________________________
Effective Date: 01/03/2008 Page 5 of 13
Confidential Controlled Document
Document No.:
BOTSWANA-HARVARD Standard Operating Procedure BHHRL/001PR04
HIV REFERENCE
LABORATORY
(BHHRL) Referral of Laboratory Testing Version : 1

Tel: +267 3902671;


Fax: +267 3901284

10. Reference
10.1. BHHRL Quality Manual Current Version
10.2. ISO/IEC 17025 International Standard

Appendix 1 – Back-up System for BHHRL


Appendix 2 – Evaluation and Selection Criteria Form

Revision History:
Revision Revision Revised By: Brief description of revision:
Level: Date:

_______________________________________________________________________________________________
Effective Date: 01/03/2008 Page 6 of 13
Confidential Controlled Document
Document No.:
BOTSWANA-HARVARD Standard Operating Procedure BHHRL/001PR04
HIV REFERENCE
LABORATORY
(BHHRL) Referral of Laboratory Testing Version : 1

Tel: +267 3902671;


Fax: +267 3901284

Appendix 1
Assay Primary Back-up
CD4 Cell Count BD FACSCalibur Flow BD FACSCalibur Flow
Cytometer (S/N E4451); Cytometer (S/N E4453); BHHRL
BHHRL Ground Floor Second Floor
BD FACSCalibur Flow
Cytometer(S/N 146000763);
BHHRL Ground Floor

Clinical Chemistry Roche Integra 400 plus; Lancet Laboratory, Gaborone


 Albumin BHHRL Ground Floor (Roche Integra 400 plus), except
 ALP
 ALT (SGPT) Lancet Laboratory, Johannesburg
 Amylase (Roche Integra 400 plus):
 AST (SGOT) Creatine Kinase
 Bicarbonate (CO2) Lipase
Prealbumin
 Bilirubin, Direct
 Bilirubin, Total
 BUN/Urea
 Calcium
 Chloride
 Cholesterol
 Creatine Kinase
 Creatinine
 Ferritin
 GGT
 Glucose
 HDL_C
 Iron
 Lactate
 LDL_C
 LDH
 Lipase
 Prealbumin
 Potassium
 Sodium
 Phosphorus/Phosphate
 Total Protein
 Transferrin
 Triglycerides

_______________________________________________________________________________________________
Effective Date: 01/03/2008 Page 7 of 13
Confidential Controlled Document
Document No.:
BOTSWANA-HARVARD Standard Operating Procedure BHHRL/001PR04
HIV REFERENCE
LABORATORY
(BHHRL) Referral of Laboratory Testing Version : 1

Tel: +267 3902671;


Fax: +267 3901284

Haematology Sysmex XE 2100; BHHRL Sysmex SF 3000; BHHRL


 Full Blood Count Ground Floor Ground Floor
OR Lancet laboratory (Gaborone)
Beckman Coulter Act5Diff
(Primary) or Beckman Coulter
HMX (Back-up)

RNA PCR Roche AmpliPrep/Amplicor; Lancet Laboratory, Johannesburg


BHHRL Ground Floor * (Roche AmpliPrep/Amplicor)

DNA PCR Amplification: Perkin Elmer Amplification: Perkin Elmer


Thermocycler; BHHRL Ground Thermocycler; BHHRL Second
Floor Floor
Detection: Molecular Devices Detection: Bio-Tek Instruments
Emax Microplate Reader Ex 800 (Universal Plate Reader
BHHRL 1st floor).
Serology (HIV ELISA & Manual Methods
Wester Blot, Syphilis RPR,
Hepatitis B Surface Antigen, Bio-Tek Universal AutoStrip Bio-Tek Universal AutoStrip
Hepatitis C) Washer (ELx 50 BHHRL Washer (ELx 50 BHHRL 1st
ground floor) floor)
Bio-Tek Universal Plate Reader Bio-Tek Universal Plate Reader
(ELx 800 BHHRL ground floor) (ELx 800 BHHRL 1st floor

_______________________________________________________________________________________________
Effective Date: 01/03/2008 Page 8 of 13
Confidential Controlled Document
Document No.:
BOTSWANA-HARVARD Standard Operating Procedure BHHRL/001PR04
HIV REFERENCE
LABORATORY
(BHHRL) Referral of Laboratory Testing Version : 1

Tel: +267 3902671;


Fax: +267 3901284

Document No; BHHRL/001FR26

Laboratory’s Name: ..................................................................................


Contact Person and Details: ......................................................................
...................................................................
...................................................................
...................................................................
...................................................................
Reason for Evaluation: Routine Testing
Back-up System
Special Circustance (Explain):
………….............................................................................................................................................
.............................................................................................................................................................
............................................................................................................................................................

Evaluated for the following tests:

Analyte / Test Matrix

_______________________________________________________________________________________________
Effective Date: 01/03/2008 Page 9 of 13
Confidential Controlled Document
Document No.:
BOTSWANA-HARVARD Standard Operating Procedure BHHRL/001PR04
HIV REFERENCE
LABORATORY
(BHHRL) Referral of Laboratory Testing Version : 1

Tel: +267 3902671;


Fax: +267 3901284

Evaluation done by: ...........................................................................................

Date: ...............................................

PLEASE ATTACH SUPPORTING DOCUMENTS AS AND WHEN NECESSARY

A. Laboratory’s Capabilities (maximum 25 points)

1. Background (1-5 points): --


a) Does the laboratory have a reputation for high quality and integrity? ……..
b) How long has the lab been in business (e.g. 5 years, 10, more)? ……..
c) What are clients' general observations regarding the lab's services? ……..

2. Experience and references (1-5 points): --


a) Has the laboratory provided a list of References? …….
b) How long have clients been served by the lab? ………..

3. Quality Management (1-5 points): --


a) Does the lab have a QMS? …………………
b) Does the Lab have a Quality Assurance Plan? …………….
c) Is the Laboratory accredited? Is the documentation available? ……..

4. Equipment (lab and data handling) (1-5 points): --


a) Is the testing equipment adequate for the scope and volume of services offered? ………..
b) Is there adequate backup in the event of equipment failure? ……….

_______________________________________________________________________________________________
Effective Date: 01/03/2008 Page 10 of 13
Confidential Controlled Document
Document No.:
BOTSWANA-HARVARD Standard Operating Procedure BHHRL/001PR04
HIV REFERENCE
LABORATORY
(BHHRL) Referral of Laboratory Testing Version : 1

Tel: +267 3902671;


Fax: +267 3901284

c) Does the automated data processing equipment capability appear to be adequate for the
scope of the work contract (e.g., direct transmissions, online result reporting)?
……………

5. Accreditation and certifications (1-5 points): --


a) SANAS ? ……………
b) Other? ………………..

Total points for section A: …………………….


Document where the lab was lacking : .................................................................................
………………………………………………………………………………………………

B. Quality assurance (maximum 25 points; assign 1-5 points for each question)
a) Is a written, organized, comprehensive quality control (QC) program in place? --
b) Is there a process for remedial action when QC tolerance limits are exceeded? --
c) Is an ongoing monitoring program in place to review, detect, and correct system errors? --
d) Is a copy of proficiency testing (PT) results available for at least the previous 24 months,
and for deficiencies noted, were appropriate and timely corrective actions documented?
Attach copies --
e) Does the laboratory have a written, clearly defined protocol for notifying clients of
critical values? --

Total points for section B: --


Document where the lab was lacking : …………………………………………………………
C. Efficiency of referral services (maximum 25 points; assign 1-5 points for each question)
a) Does the lab offer a sufficient range of services to satisfy our needs? --
b) Does the lab provide a written TAT for each test performed, and does the TAT meet our
needs? --
c) Are data elements for each test complete? --

d) Operational systems: (1-5 points for each item below) --


1. General management/overall assessment of policies/procedures --
2. Methods used for testing/reporting results --
3. Specimen handling policies/procedures. Includes clearly defined, comprehensive
instructions for preparing specimens as well as criteria for rejecting
unsatisfactory specimens --
4. Equipment maintenance policies --
5. Information and data handling policies/procedures --
6. Printing of reports via computer or printer in participating lab (is printer
provided?) --
7. Adequate specimen pick-up service?...
8. Does the lab have a written protocol for reviewing test reports for possible
errors? --
9. Is the test report format clear and can it be read easily? --
_______________________________________________________________________________________________
Effective Date: 01/03/2008 Page 11 of 13
Confidential Controlled Document
Document No.:
BOTSWANA-HARVARD Standard Operating Procedure BHHRL/001PR04
HIV REFERENCE
LABORATORY
(BHHRL) Referral of Laboratory Testing Version : 1

Tel: +267 3902671;


Fax: +267 3901284

10. Does the lab provide client consultation services on a daily basis, including client
services, technical advice, and medical consultation concerning appropriate test
ordering and interpretation of results? --

Points for d) should be awarded subjectively, based on past experience, if possible. If not, call
references for information.

Total points for section C: --


Document where the lab was
lacking: .......................................................................... ....................................................................
...................................................................

D. Personnel (maximum 30 points; assign 0-5 points for each question)


1. Percentage of technologists to technicians: [is greater than] 75% (5 points); 50%
(3 points); [is less than] 25% (0 points) --
2. Does the lab employ a qualified supervisor during all hours of operation? Yes (5
points); No (0 points) --
3. Are specific staff members assigned to assist us at all times? Yes (5 points); No
(0 points) --
4. Are doctoral-level scientists or pathologists available for consultation? Yes (5
points); No (0 points) --
5. Does the technical staff have expertise in all areas required? Yes (5 points); No
(0 points) --
6. Does the technical staff receive continuing education on an ongoing basis and is
this education documented? Yes (5 points); No (0 points) --

Total points for section D: --


Document where the lab was lacking: .................................................................................. ......

E. Results for method and instrument comparison studies: Acceptable /Unacceptable .


Explain:
.............................................................................................................................................................
.............................................................................................................................................................
.............................................................................................................................................................
............................................................................................................................................................

Evaluator’s comments: .......................................................................................................................


.............................................................................................................................................................
............................................................................................................................................................

Lab Manager:
Comments: ............................................................................................................................ ............
...................................................................................................................................
...............................................................................................................................................
_______________________________________________________________________________________________
Effective Date: 01/03/2008 Page 12 of 13
Confidential Controlled Document
Document No.:
BOTSWANA-HARVARD Standard Operating Procedure BHHRL/001PR04
HIV REFERENCE
LABORATORY
(BHHRL) Referral of Laboratory Testing Version : 1

Tel: +267 3902671;


Fax: +267 3901284

Lab Approved /Not Approved

Signature: .................................................. Date: ...........................

_______________________________________________________________________________________________
Effective Date: 01/03/2008 Page 13 of 13
Confidential Controlled Document

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