Plasmids

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Plasmids, types and applications

Dr. Namita Ashish Singh


Assistant Professor
Department of Microbiology,
MLSU Udaipur
Plasmid
Plasmid is an extra chromosomal DNA molecule which
•is capable of replicating independently from the
chromosomal DNA.
• They are found in numbers ranging from one per cell to
hundreds per cell (this is called "copy number").
INTRODUCTION
• Discovered by Laderberg in 1952.
• It naturally occur in bacteria, however sometimes present in
archaea and eukaryotes.
• Plasmids vary in size, but most are between 1,000 to 25,000
base pairs.
• The genes carried in plasmid benefit the survival of the organism
by providing them with genetic advantages like antibiotic
resistance etc. under certain situation or conditions.
• They provide mechanism for horizontal gene transfer within a
population of microbes
PROPERTIES
• Specific to one or a few particular bacteria.
• Replicate independently and code for their own transfer.
• Do not cause damage to cells and generally are beneficial
• Size ranges from 1 kbp to several mbp.
• Number of plasmids in an individual cell may vary, ranging
from one to several hundreds, denoted by copy number.
• Some produces virulence factor that help in defence or
nutrient utilization.
• Plasmids can also provide bacteria with the ability to fix
nitrogen.
• Some also exhibits properties like sulphur utilization,
hydrocarbon degradation, drug resistance etc.
MODE OF PLASMID TRANSFER

The genetic information encoded in a plasmid of


bacteria is transferred across a broad range of
microorganism via-

1. Transformation: requires competent cells which are ready to accept


extracellular plasmid and further stable replication inside host cell.

2. Transduction: plasmid mediated gene transfer through bacteriophages.(can be


generalised or specialised)

3.Conjugation: transfer through cell to cell contact of donor and recipient cell,
requires DNA metabolism of donor cell.
Types of plasmids

There are five main classes :

1 Fertility- F-plasmids
c) They are capable of conjugation (transfer of genetic
material between bacteria) and result in the
expression of sex pilli.
Example: F plasmid of E. coli.
Hfr strain contain F factor integrated with their chromosome
It occurs with high frequency but connection between cells usually breaks before
the process is completed, so F- remains F-
F’ and F- Conjugation
2 Resistance- R-plasmids which contain genes that can build a resistance
against antibiotics or heavy–metal. Historically known as R factors, before the
nature of plasmids was understood.
e. g., pRP4 of Pseudomonas sp.

3 Col-plasmids
which contain genes that code for bacteriocins, that can kill other
bacteria. e. g., ColE1

4 Degradative plasmids They are able to digest unusual substances like toluene
and salicylic acid. e.g.,TOL plasmid of Pseudomonas putida.

5 Virulence plasmids
which turn the bacterium into a pathogen. contains vir genes which turn the
bacterium into a pathogen.
e. g., Ti & Ri plasmids
Plasmid Exchange

• Bacteria can exchange or transfer plasmid between


other bacteria in three different ways.

• In every case the source cells of the plasmid are called


the
–DONORS-

and the cells that receive the plasmid are called the
–-RECIPIENTS-
The three forms of bacterial DNA exchange
are :

1) CONJUGATION
This process involves one bacterium making a copy of a
plasmid, and transferring that copy to another bacterium.
2) TRANSFORMATION
This is the process in which a recipient cell takes up plasmid
DNA from the environment (such as DNA released from a dead
organism.

It is the one of the method of bacterial recombination


Discovered by Fred Griffith in 1928

Competency is complex phenomenon and dependent on several


conditions

Transformation frequency of competent cells is around 10-3

Gene transfer by this method occurs in soil and aquatic


environment
Transformation

Crossing
over

Insertion
Transduction

It is a process in which DNA fragment is transferred from one bacterium to another by a bacteriophage

Discovered by Joshua Lederberg and Zinder in 1952

Transduction is of two types:


1) Generalized transduction: A DNA fragment is transferred from one bacterium to another by a lytic bacteriophage that is now carrying donor bacterial DNA due to an error in

maturation during the lytic life cycle.



2) Specialized transduction: A DNA fragment is transferred from one bacterium to another by a temperate bacteriophage that is now carrying donor bacterial DNA due to an error

in spontaneous induction during the lysogenic life cycle


Transduction:
Generalized
Infection Destruction of
the bacteria’s
DNA

Replication of
the viral
genome
Production of
viral parts
Lysis Packaging
Conformations of plasmids

Plasmid DNA may appear


in different conformations,
like, coiled, Supercoiled,
circular and linear, which
(for a given size) run at
different speeds in a gel
during electrophoresis:

Supercoiled
Applications of plasmids
• Plasmids are extremely valuable tools in the fields of
molecular biology and genetics, specifically in the area of
genetic engineering where they are commonly used to
multiply (make many copies of ) particular genes .

• Plasmids in this conditions are called vectors .


They play a critical role in :

 gene cloning, recombinant protein production


(e.g., of human insulin). Another major use of plasmids
is to make large amounts of proteins. In this case,
researchers grow bacteria containing a plasmid
harboring the gene of interest.
eg: insulin & antibiotics.
Many plasmids are commercially available for such uses.

Gene therapy- plasmid vectors are used for the insertion of


therapeutic genes at pre- selected chromosomal target sites
within the human genome.

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