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ORCIDJournal of Computational Biology, Volume 4
Volume 4, Number 1, Spring 1997
- William E. Hart, Sorin Istrail:
Robust Proofs of NP-Hardness for Protein Folding: General Lattices and Energy Potentials. 1-22 - Martin Vingron, Arndt von Haeseler:
Towards Integration of Multiple Alignment and Phylogenetic Tree Construction. 23-34 - M. S. Tanushev, Richard Arratia:
Central Limit Theorem from Renewal Theory for Several Patterns. 35-44 - Timothy L. Bailey, Michael Gribskov
:
Score Distributions for Simultaneous Matching to Multiple Motifs. 45-59 - Sophie Schbath:
Coverage Processes in Physical Mapping by Anchoring Random Clones. 61-82 - Mikhail P. Ponomarenko, A. N. Kolchanova, Nikolay A. Kolchanov:
Generating Programs for Predicting the Activity of Functional Sites. 83-90
Volume 4, Number 2, Spring 1997
- Thomas S. Anantharaman, Bud Mishra, David C. Schwartz:
Genomics via Optical Mapping II: Ordered Restriction Maps. 91-118 - Vlado Dancík, Sridhar Hannenhalli, S. Muthukrishnan:
Hardness of Flip-Cut Problems from Optical Mapping. 119-125 - John C. Henderson, Steven Salzberg, Kenneth H. Fasman:
Finding Genes in DNA with a Hidden Markov Model. 127-141 - Paul E. Kearney:
A Six-Point Condition for Ordinal Matrices. 143-156 - Martin Farach:
Recognizing Circular Decompossible Metrics. 157-162 - Dorit S. Hochbaum, Anu Pathria:
Path Costs in Evolutionary Tree Reconstruction. 163-175 - Louxin Zhang:
On a Mirkin-Muchnik-Smith Conjecture for Comparing Molecular Phylogenies. 177-187 - Sophie Schbath:
An Efficient Statistic to Detect Over-and Under-Represented Words in DNA Sequences. 189-192 - J. Z. Dalgaard, M. J. Moser, Richard Hughey, I. Saira Mian:
Statistic Modeling, Phylogenetic Analysis and Strjucture Prediction of a Protein Splicing Domain Common to Infeins and Hedgehog Proteins. 193-214
Volume 4, Number 3, Fall 1997
- Michael S. Waterman, Sorin Istrail, Pavel A. Pevzner:
Selected Papers from RECOMB'97 - Preface. J. Comput. Biol. 4(3): 215-216 (1997) - Temple F. Smith, Loredana Lo Conte, Jadwiga R. Bienkowska, Chrysanthe Gaitatzes, Robert G. Rogers, Richard H. Lathrop:
Current Limitations to Protein Threading Approaches. 217-225 - Ken A. Dill, Andrew T. Phillips, J. Ben Rosen:
Protein Structure and Energy Landscape Dependence on Sequence Using a Continuous Energy Function. 227-239 - William E. Hart, Sorin Istrail:
Lattice and Off-Lattice Side Chain Models of Protein Folding: Linear Time Structure Prediction Better than 86% of Optimal. 241-259 - Bonnie Berger, Mona Singh:
An Iterative Method for Improved Protein Structural Motif Recognition. 261-273 - Richa Agarwala, Serafim Batzoglou, Vlado Dancík, Scott E. Decatur, Sridhar Hannenhalli, Martin Farach, S. Muthukrishnan, Steven Skiena:
Local Rules for Protein Folding on a Triangular Lattice and Generalized Hydrophobicity in the HP Model. 275-296 - Sing-Hoi Sze, Pavel A. Pevzner:
Las Vegas Algorithms for Gene Recognition: Suboptimal and Error-Tolerant Spliced Alignment. 297-309 - Martin G. Reese, Frank H. Eeckman, David Kulp, David Haussler:
Improved Splice Site Detection in Genie. 311-323 - Ying Xu, Edward C. Uberbacher:
Automated Gene Identification in Large-Scale Genomic Sequences. 325-338 - Zheng Zhang, William R. Pearson, Webb Miller:
Aligning a DNA Sequence with a Protein Sequence. 339-349 - Gary Benson:
Sequence Alignment with Tandem Duplication. 351-367 - Eric L. Anson, Eugene W. Myers:
ReAligner: A Program for Refining DNA Sequence Multi-Alignments. 369-383 - Tetsuo Shibuya, Hiroshi Imai:
New Flexible Approaches for Multiple Sequence Alignment. 385-413 - Benno Schwikowski, Martin Vingron:
The Deferred Path Heuristic for the Generalized Tree Alignment Problem. 415-431
Volume 4, Number 4, Winter 1997
- Thomas Christof, Michael Jünger, John D. Kececioglu, Petra Mutzel, Gerhard Reinelt:
A Branch-and-Cut Approach to Physical Mapping of Chromosomes by Unique End-Probes. 433-447 - Mudita Jain, Eugene W. Myers:
Algorithms for Computing and Integrating Physical Maps Using Unique Probes. 449-466 - Fengzhu Sun, Gary Benson, Norman Arnheim, Michael S. Waterman:
Pooling Strategies for Establishing Physical Genome Maps Using FISH. 467-486 - Donna K. Slonim, Leonid Kruglyak, Lincoln Stein, Eric S. Lander:
Building Human Genome Maps with Radiation Hybrids. 487-504 - S. C. Heath:
Markov Chain Monte Carlo Methods for Radiation Hybrid Mapping. 505-515 - Amir Ben-Dor, Benny Chor:
On Constructing Radiation Hybrid Maps. 517-533 - Shili Lin, Terence P. Speed:
An Algorithm for Haplotype Analysis. 535-546 - Jaime Cohen, Martin Farach:
Numerical Taxonomy on Data: Experimental Results. 547-558 - David Sankoff, Vincent Ferretti, Joseph H. Nadeau:
Conserved Segment Identification. 559-565
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