Degradation of The Fluoroquinolone Enrofloxacin by The Brown Rot Fungus Gloeophyllum Striatum: Identification of Metabolites
Degradation of The Fluoroquinolone Enrofloxacin by The Brown Rot Fungus Gloeophyllum Striatum: Identification of Metabolites
Degradation of The Fluoroquinolone Enrofloxacin by The Brown Rot Fungus Gloeophyllum Striatum: Identification of Metabolites
11
0099-2240/97/$04.0010
Copyright © 1997, American Society for Microbiology
The degradation of enrofloxacin, a fluoroquinolone antibacterial drug used in veterinary medicine, was
investigated with the brown rot fungus Gloeophyllum striatum. After 8 weeks, mycelia suspended in a defined
liquid medium had produced 27.3, 18.5, and 6.7% 14CO2 from [14C]enrofloxacin labeled either at position C-2,
at position C-4, or in the piperazinyl moiety, respectively. Enrofloxacin, applied at 10 ppm, was transformed
into metabolites already after about 1 week. The most stable intermediates present in 2-day-old supernatants
were analyzed by high-performance liquid chromatography combined with electrospray ionization mass spec-
trometry. Eight of 11 proposed molecular structures could be confirmed by 1H nuclear magnetic resonance
spectroscopy or by cochromatography with reference compounds. We identified (i) 3-, 6-, and 8-hydroxylated
congeners of enrofloxacin, which have no or only very little residual antibacterial activity; (ii) 5,6- (or 6,8-), 5,8-,
and 7,8-dihydroxylated congeners, which were prone to autoxidative transformation; (iii) an isatin-type com-
pound as well as an anthranilic acid derivative, directly demonstrating cleavage of the heterocyclic core of
enrofloxacin; and (iv) 1-ethylpiperazine, the 7-amino congener, and desethylene-enrofloxacin, representing
both elimination and degradation of the piperazinyl moiety. The pattern of metabolites implies four principle
routes of degradation which might be simultaneously employed. Each route, initiated by either oxidative
decarboxylation, defluorination, hydroxylation at C-8, or oxidation of the piperazinyl moiety, may reflect an
initial attack by hydroxyl radicals at a different site of the drug. During chemical degradation of [4-14C]en-
rofloxacin with Fenton’s reagent, five confirmatory metabolites, contained in groups i and iv, were identified.
These findings provide new evidence in support of the hypothesis that brown rot fungi may be capable of
producing hydroxyl radicals, which could be utilized to degrade wood and certain xenobiotics.
Fluoroquinolones (FQs) have found wide application in hu- (among other antibiotics) in a marine sediment was assessed.
man and veterinary medicine. They are active against a broad Its apparent depuration was attributed to leaching and redis-
spectrum of pathogenic gram-negative and gram-positive bac- tribution rather than to degradation (21).
teria (18, 49). Enrofloxacin (Fig. 1) has been developed for Recently, we have shown in vitro degradation of enrofloxa-
veterinary use to treat infections in pet animals and livestock cin by the white rot fungus Phanerochaete chrysosporium and by
(7, 44). In mammals, FQs can be metabolized by glucuronida- Gloeophyllum striatum, representing the brown rot fungi. After
tion, sulfation, N dealkylation, and oxidation of the amine 4 weeks of incubation, 6 and 16% 14CO2, respectively, were
substituent (27, 42). However, a major fraction is excreted produced from [4-14C]enrofloxacin in liquid cultures (45). Fur-
unchanged and introduced into the environment via animal thermore, four species of white rot fungi and three strains of
waste (51). Furthermore, manure from livestock is often dis- G. striatum were found to degrade [4-14C]enrofloxacin bound
posed of by being spread onto agricultural soil and pastures. to straw by up to 50% within 8 weeks. Enrofloxacin pread-
Little is known about both the biodegradability and fate of sorbed to agricultural soil could also be metabolized, although
antibiotics in the environment (17, 21, 31). Fluorinated aro- at a much lower rate, possibly reflecting decomposition of the
matic compounds, as exemplified by FQs, are xenobiotics; i.e., matrix to which the drug was bound (33).
they are man-made and have not been found to occur naturally White rot fungi like P. chrysosporium are known to degrade
(20, 36). However, FQs are tightly bound to soil and feces (13, the lignin component of woody plant cell walls as well as a wide
31, 34). In contrast to earlier views, such binding might be spectrum of pollutants such as polyaromatic hydrocarbons,
regarded as being quite a favorable characteristic of a sub- polychlorinated biphenyls, chlorinated pesticides (e.g., dichlo-
stance (23), because bound molecules should hardly be bio- rodiphenyltrichloroethane and lindane), and explosives (e.g.,
available. As a consequence, FQs might not exert a significant trinitrotoluene) (4, 6, 8–10, 15, 35). Such activities were attrib-
selection pressure in situ, e.g., in eliminating specific parts of a uted to lignin peroxidases, manganese-dependent peroxidases,
bacterial population or in selecting for resistance. However, and laccases. These extracellular enzymes are thought to cat-
strong binding can be expected to delay degradation and may alyze oxidative degradation reactions via diffusible agents like
partly explain the apparent recalcitrance of FQs (21, 31). aryloxy radicals, Mn31, and even hydroxyl radicals, with the
Biodegradation of sarafloxacin, an FQ used in poultry med- latter being produced by secondary reactions. Mechanistically,
icine, has been studied in three different types of soils. From none of these processes is fully understood (4, 14, 15, 19, 25).
[2-14C]sarafloxacin, #0.6% 14CO2 was produced after 80 days Brown rot fungi preferentially degrade the cellulose and
(31). In another investigation, the persistence of sarafloxacin hemicellulose components of plant cell walls, while lignin has
been shown to be modified primarily by hydroxylation and
demethylation and to a minor extent by depolymerization (15,
* Corresponding author. Phone: 49 2173 38 4882. Fax: 49 2173 38 32). For the decay of wood, a Fenton-type reaction mechanism
3766. was first postulated by Koenigs (30). In various model systems,
4272
VOL. 63, 1997 METABOLITES OF ENROFLOXACIN 4273
F-1......................................................1-Cyclopropyl-7-(4-ethyl-1-piperazinyl)-6-fluoro-3-hydroxy-4-1H-quinolinone
F-2......................................................1-Cyclopropyl-7-(4-ethyl-1-piperazinyl)-1,4-dihydro-6-hydroxy-4-oxo-3-quinolinecarboxylic acid
F-3......................................................1-Cyclopropyl-6-(4-ethyl-1-piperazinyl)-5-fluoro-1H-indole-2,3-dione
F-4a ....................................................1-Cyclopropyl-7-{[2-(ethylamino)ethyl]amino}-6-fluoro-1,4-dihydro-4-oxo-3-quinolinecarboxylic acid
F-5......................................................1-Cyclopropyl-7-(4-ethyl-1-piperazinyl)-1,4-dihydro-6,8(5,6)-dihydroxy-4-oxo-3-quinolinecarboxylic acid
F-6a ....................................................1-Cyclopropyl-7-(4-ethyl-1-piperazinyl)-6-fluoro-1,4-dihydro-8-hydroxy-4-oxo-3-quinolinecarboxylic acid
F-7......................................................1-Cyclopropyl-7-(4-ethyl-1-piperazinyl)-6-fluoro-1,4-dihydro-5,8-dihydroxy-4-oxo-3-quinolinecarboxylic acid
F-8a ....................................................1-Cyclopropyl-6-fluoro-1,4-dihydro-7,8-dihydroxy-4-oxo-3-quinolinecarboxylic acid
F-9a ....................................................7-Amino-1-cyclopropyl-6-fluoro-1,4-dihydro-4-oxo-3-quinolinecarboxylic acid
F-10a ..................................................1-Ethylpiperazine
F-11a ..................................................2-Cyclopropylamino-4-(4-ethyl-1-piperazinyl)-5-fluorobenzoic acid
a
A chemically prepared reference compound is available.
4274 WETZSTEIN ET AL. APPL. ENVIRON. MICROBIOL.
RESULTS
TABLE 2. HPLC retention times, pseudomolecular ions in MS, and characteristics of the UV absorption spectra of
[4-14C]enrofloxacin and metabolites
Value for:
Characteristic
Enrofloxacin F-1 F-2 F-3 F-4 F-5 F-6 F-7 F-8 F-9 F-10c F-11
a b
Retention time (min) 27.7 18.1 19.5 — 22.4 24.6 26.7 36.7 37.2 38.5 2.5 28.4e
Pseudomolecular iond 360 332 358 318 334 374 376 392 280 263 115 308
(M 1 H)1) (m/z)
UV absorption (nm)
lmax (major) 278 283 278 —b 276 288 245 247 272 271 250e
lmax (minor) 316, 328 346 339 260 330 353 250, 327 278e, 352e
Shoulder 335 338 271 264
a
Determined by HPLC method I, as described in Materials and Methods.
b
—, not detectable by HPLC with either UV or radioactivity detection.
c
Data are derived from an experiment with [piperazine-2,3-14C]enrofloxacin.
d
(M 1 H)1 was accompanied by (M 1 2 1 H)1 resulting from the 14C label; in addition, (M 1 4 1 H)1 was present in F-10.
e
Generated from the reference substance.
4276 WETZSTEIN ET AL. APPL. ENVIRON. MICROBIOL.
FIG. 5. Proposed principle routes of degradation of enrofloxacin (routes A to D) employed by the brown rot fungus G. striatum. Monohydroxylated metabolites
(F-1, F-2, and F-3) may result from an initial attack of enrofloxacin by hydroxyl radicals at different sites of the molecule. Secondary and subsequent attacks at one of
various possible sites in each of these primary metabolites may cause branching of the routes, resulting in a network of metabolites. However, only the most stable
intermediates could be isolated and characterized.
(iv) F-5. Metabolite F-5 (Table 1) had a molecular weight of After purification, i.e., separation from enrofloxacin, F-6 was
373 (Table 2). This could have resulted from an elimination of analyzed by NMR. The spectrum contained all signals typical
fluorine, combined with a twofold hydroxylation. Due to matrix of the ethylpiperazinyl and the cyclopropyl groups (Table 3).
components, the aliphatic region of its NMR spectrum could Only two protons were detected in the aromatic region, a
not be analyzed. However, in the aromatic region two signals singlet assigned to H-2 and a doublet specifically assigned to
were detected. A singlet at 8.58 ppm could be specifically H-5 due to ortho coupling with fluorine (Table 3). Since the
assigned to H-2. Another singlet at 7.02 ppm (absence of H,F molecular mass was increased by 16 Da, F-6 was identified
coupling) indicated the loss of fluorine. Because of the absence as 8-hydroxyenrofloxacin (Fig. 5). The reference compound
of a further aromatic proton signal, and based on the molec- showed an identical NMR spectrum (not shown).
ular weight, two structural alternatives have to be envisaged: a (vi) F-7. The molecular weight of 391 determined for F-7
5,6- or a 6,8-dihydroxylated congener of enrofloxacin (Fig. 5). suggested a twofold hydroxylation (Tables 1 and 2). The NMR
F-5 was rapidly decomposed. spectrum of F-7 revealed only one singlet at 8.77 ppm, typical
(v) F-6. Identified primarily by cochromatography, metabo- of H-2. Hence, the two hydroxyl groups could have been in-
lite F-6 (Table 1) had a molecular weight of 375 (Table 2). troduced only at C-5 and C-8 (Fig. 5). Matrix compounds
VOL. 63, 1997 METABOLITES OF ENROFLOXACIN 4277
FIG. 6. The 500-MHz 1H-NMR spectrum (including expanded areas) of the decarboxylated congener of enrofloxacin (F-1) formed by G. striatum.
masked the aliphatic region and prevented further NMR H2O)1], which were also observed with reference compound.
assignments. F-7 was already decomposed during purifica- The NMR spectrum showed that the 1-ethylpiperazine moiety
tion. had been cleaved off (compare with Fig. 4, trace C). Only two
(vii) F-8. Metabolite F-8 (Table 1) was first identified by aromatic protons were present, H-5 (d, d 5 7.57 ppm, JH,F 5
cochromatography. Its molecular weight of 279 (Table 2) was 10.1 Hz) and H-2 (s, d 5 8.82 ppm). Two 2H multiplets (at 0.99
indicated by ions at m/z 280 and 262 [(M 1 H)1 and (M 1 H 2 and 1.10 ppm) and a 1H multiplet (at 4.18 ppm) were charac-
Metabolites generated from enrofloxacin. HPLC elution been studied in detail. However, degradation of enrofloxacin
profiles of supernatants from up-to-5-day-old cultures of G. was very sensitive to hydroxyl-radical-scavenging agents like
striatum indicated that even the most abundant metabolites ethanol and dimethyl sulfoxide (19, 43). Hence, our results
appeared only transiently. Already 2 days after the transfer may represent new evidence in support of the hypothesis that
from malt into mineral medium, the five major metabolites brown rot fungi are able to catalyze the formation of hydroxyl
were reaching maximum concentrations (Fig. 3). When all radicals in a Fenton-type reaction. Under our experimental
three differently labeled enrofloxacin molecules were simulta- conditions, this mechanism might have been employed to de-
neously employed in parallel cultures, almost identical patterns grade enrofloxacin. The proposed degradation routes, shown
of metabolites were obtained (Fig. 4). Such profiles were com- in Fig. 5, may reflect different sites of initial attack of enro-
posed of up to 25 peaks, as detected by HPLC-MS. Individual floxacin by hydroxyl radicals. Each of the primary metabolites
fractions were purified and analyzed by combining HPLC, offers various sites for a secondary attack, which would cause
HPLC-MS, and 1H-NMR spectroscopy. The proposed molec- branching of the routes, resulting in the formation of a network
ular structures of 3 of 11 metabolites, F-1, F-2, and F-6 (chem- of metabolites; this could explain the high number of metab-
ical names are given in Table 1), could be confirmed by com- olites observed by HPLC-MS. The molecular weights of some
plete 1H-NMR spectra. Four structures (those of F-4, F-5, F-7, unidentified metabolites, detectable only by HPLC-MS, would
and F-8) were ascertained by an analysis of the aromatic re- be consistent with such a network.
gions of their NMR spectra, while metabolites F-4, F-8, and Enrofloxacin was also chemically degraded by Fenton’s re-
F-9 could also be identified by cochromatography with chem- action, in which hydroxyl radicals are generated from hydrogen
ically prepared reference compounds and by their UV absorp- peroxide and Fe21 (50). The identification of all three charac-
tion spectra. The identification of metabolites F-3, F-10, and teristic monohydroxylated congeners of enrofloxacin as well as
F-11 had to be based on MS techniques. of the two typical intermediates indicating the degradation of
The identified metabolites were assigned to four groups of the piperazinyl moiety supports the proposed role of hydroxyl
compounds: (i) monohydroxylated congeners of enrofloxacin radicals in G. striatum. The metabolic scheme outlined in Fig.
(F-1, F-2, and F-6), (ii) dihydroxylated congeners of enrofloxa- 5 would be in agreement with the pattern of metabolites gen-
cin (F-5, F-7, and F-8), (iii) an isatin-type (F-3) and an anthra- erated by Fenton’s reaction, although it was not possible to
nilic acid (F-11) derivative of enrofloxacin, and (iv) desethyl- isolate dihydroxylated metabolites from such reaction mix-
ene-enrofloxacin (F-4), the 7-amino congener of enrofloxacin tures.
(F-9), and 1-ethylpiperazine (F-10). Preliminary experiments in our laboratory have shown that
These groups of metabolites led us to propose the metabolic G. striatum gives rise to a pronounced chemiluminescence sig-
scheme shown in Fig. 5. It consists of four principle degrada- nal under the assay conditions described by Backa and col-
tion routes, which, due to the similar concentrations of all leagues (3), which has been proposed to directly indicate the
major metabolites, might be simultaneously employed. Route formation of hydroxyl radicals in wood shavings. Degradation
A would be initiated by an oxidative decarboxylation. This of lignocellulose and pollutants by reactions involving free
irreversibly inactivates the drug, because the carboxyl group is radicals occurs extracellularly (4, 15, 25). However, the site of
essential for antibacterial activity of FQs (12). An isatin-type enrofloxacin degradation in G. striatum is not known at
intermediate (F-3) as well as the anthranilic acid derivative present.
(F-11) indicate cleavage of the heterocyclic core of enrofloxa- In addition to the reactions found in wood-rotting basidio-
cin as well as the successive loss of C-2 and C-3, while C-4 was mycetes, other mechanisms are involved in aerobic degrada-
retained. Isatin is a known intermediate in degradation path- tion of N-heterocyclic compounds in bacteria and fungi (2, 26,
ways of indole and tryptophan (2, 39). Liberation of 14CO2 39). Key steps in the degradation of compounds containing
from [4-14C]enrofloxacin (as shown in Fig. 2) involves F-11 and structural elements also found in enrofloxacin, e.g., 3-carboxy-
probably metabolites from the other degradation routes as pyridine (nicotinic acid), 3,4-dihydroxypyridine, quinoline, 1H-
well. The degradation of anthranilic acid is a well-documented 4-oxoquinoline, and anthranilic acid, are catalyzed mostly by
natural process (2, 39). molybdenum-containing dehydrogenases, dioxygenases, or mo-
Route B would be initiated by defluorination of enrofloxa- nooxygenases. Bauer and coworkers reported the degradation
cin. This eliminates the xenobiotic structural element and re- of 1H-3-hydroxy-4-oxoquinoline by Pseudomonas putida even
duces the antibacterial potential of metabolite F-2 (in terms of via 2,4-dioxygenation, with concomitant elimination of carbon
increased MICs) to #3% (12, 43). Route C could be initiated monoxide (5). However, FQs might not be readily accessible
by hydroxylation of enrofloxacin at position C-8. This modifi- for such enzymes. Due to the fluorine substituent and the
cation reduces the antibacterial potential of F-6 to #5% (43) carbonyl as well as the carboxyl group, the heterocyclic core of
and most likely enhances its further degradation. Dihydroxy- enrofloxacin tends to be electron deficient. In addition, the
lated congeners are included in routes B and C. Such autoxi- high degree of substitution might prevent an enzymatic attack
dizable structures are prone to undergo further oxidative deg- due to steric hindrance. Thus, the radical-based mechanisms,
radation, which might even include the cleavage of the potentially employed by wood-rotting basidiomycetes, may
homoaromatic part of enrofloxacin. Metabolites F-5, F-7, and provide the most suitable, if not the only, means to initiate
F-8 were found to be decomposed already during purification, degradation of such complex compounds. The ability of G.
even in the frozen state. striatum to cleave the core structure of enrofloxacin also con-
Route D shows an oxidative degradation of the piperazinyl tradicts the reported apparent inability of brown rot fungi to
moiety. This sequence of reactions is apparently initiated by degrade the aromatic components of lignin (15). Moreover,
the formation of a carbonyl group, as was shown for cipro- the reported growth of the brown rot fungus Lentinus lepideus
floxacin (27). Degradation of F-4 should result in the forma- on methoxylated aromatic compounds as sole sources of car-
tion of F-9, the 7-amino congener of enrofloxacin, which has a bon is physiological evidence implying ring cleavage (11).
residual antibacterial activity on the order of #3%, as com- Clearly, much more work is required to elucidate the reaction
pared to the parent drug (43). mechanism(s) utilized by brown rot fungi and to reveal their
Proposed degradation mechanism. So far, the molecular true potential in the degradation of lignocellulose and xenobi-
mechanism of enrofloxacin degradation by G. striatum has not otics.
4280 WETZSTEIN ET AL. APPL. ENVIRON. MICROBIOL.
Ecological perspectives. In practice, animals undergoing an- 11. Collett, O. 1992. Aromatic compounds as growth substrates for isolates of
tibacterial therapy will excrete a substantial fraction of an the brown-rot fungus Lentinus lepideus (Fr. ex. Fr.) Fr. Mater. Org. 27:67–77.
12. Domagala, J. M. 1994. Structure-activity and structure-side-effect relation-
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Because nonspecific binding restricts the mobility of FQs in the thetic lignin by laccase. FEBS Lett. 391:144–148.
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that for the surrounding humus matrix. to hydroxyl radicals and ferric iron to ferrous iron. Mokuzai Gakkaishi
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in the global carbon cycle (6, 32), but very little is known about 24. Hyde, S. M., and P. M. Wood. 1996. Kinetic and antigenic similarities for
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ACKNOWLEDGMENTS antimicrobial agents, p. 195–223. In D. C. Hooper and J. S. Wolfson (ed.),
Quinolone antimicrobial agents, 2nd ed. American Society for Microbiology,
We thank our colleagues at various chemistry departments at Bayer, Washington, D.C.
namely, W. Hallenbach, R. Koch, R. Körmeling, U. Petersen, H. Rast, 28. Kirk, T. K., R. Ibach, M. D. Mozuch, A. H. Conner, and T. L. Highley. 1991.
and R. Thomas, for providing the labeled and unlabeled standard Characteristics of cotton cellulose depolymerized by a brown-rot fungus, by
compounds. Furthermore, we thank S. Ochtrop, A. Gerhardt, and acid, or by chemical oxidants. Holzforschung 45:239–244.
J. Schneider, for excellent technical assistance. 29. Kleman-Leyer, K., E. Agosin, A. H. Conner, and T. K. Kirk. 1992. Changes
in molecular size distribution of cellulose during attack by white rot and
brown rot fungi. Appl. Environ. Microbiol. 58:1266–1270.
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